As I understand the Hydrolight, the GUI creates incfiles.for which
contains a number of appropriate subroutine calls. This file is then
used in compiling an executable. The GUI also writes Iroot.txt which
contains many parameters and file names which are read at execution
time.

Therefore, if one wants to construct an ensemble of simulations that
differ in their input parameter values, one could create incfiles in
Windows, transfer it to Linux and compile there. In addition, one
could also write a program (e.g. in MATLAB or FORTRAN) to generate a
series of Iroot's and simulations (Of course, one could do this in
Windows as well, but some of us have reasons for wanting to work in
Linux).

This would seem to be any easy way to use Hydrolight in Linux without
going to the trouble of writting a program to generate incfiles.

Is my logic or understanding flawed?

Many Thanks for comments,

Jim Helbig