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Reading tab-delimited numeric data into arrays in Python   Message List  
Reply | Forward Message #268 of 364 |
Re: [PhillyPug] Re: Reading tab-delimited numeric data into arrays in Python

Peter Perez wrote:
>
> Thanks to Kevin and Andrew for your suggestions. I do know the exact
> number of columns and rows of the files, but I forgot to mention that
> the files contain headers for each column. I realized that this is
> important, since I tried the abovementioned solutions and they both seem
> to require only-numeric data. How can I tell python to ignore the
> headers and import only the numeric data in the columns? Thanks so much
> for your help. Best Regards, Peter

You could just wrap the function call to int() or float() in a
try/except block. That would catch the exception and handle it properly:

col1 = []
col2 = []

def populateColumns(row):
col1.append(row[0])
col2.append(row[1])

r = csv.reader(open(fname, 'rb'))
for row in r:
try:
row = map(float, row)
populateColumns(row)
except:
pass

When you try to map the float() function to a string, it will throw an
error. The try/except block will take care of that for you.

- khill




Fri Feb 22, 2008 8:12 pm

khill3210
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Forward
Message #268 of 364 |
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Hi all, I need to read a tab-delimited file with numeric data in columns, and then create an array with each of the columns of the file. Although I am a newbie...
Peter Perez
plpd00
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Feb 22, 2008
6:24 pm

... You should use the "rb" flag - csv likes the file opened as binary. ... Do you know how many columns you have in the file? And if so, does the column...
Kevin Hill
khill3210
Offline Send Email
Feb 22, 2008
6:36 pm

Thanks to Kevin and Andrew for your suggestions. I do know the exact number of columns and rows of the files, but I forgot to mention that the files contain...
Peter Perez
plpd00
Offline Send Email
Feb 22, 2008
7:36 pm

... You could just wrap the function call to int() or float() in a try/except block. That would catch the exception and handle it properly: col1 = [] col2 =...
Kevin Hill
khill3210
Offline Send Email
Feb 22, 2008
8:12 pm

This will all get read as strings, and you'll have to do the data conversion yourself. For each row (if it's all data), you should be able to something like: ...
Andrew Gwozdziewycz
jyrixx
Offline Send Email
Feb 22, 2008
6:49 pm
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