Dear all, I am installing cns 1.1 under Fedro Core 3 x86_64 version on a Dell Precision 470 workstation (Dual 64bit Xeon). According to the suggestions on this...
Hi, I am refining a structure which is O- glycosylated at SER. But the "carbohydrate.top" dose not contain the patch for alpha 1-O linkage. Please help me to...
I have solved a mad site and now have the hkl file associated with it. I would like to add another SAD data set to it to further phasing. When i use the hkl...
Hi all, I am trying to refine a partial model with CNS. The model is not complete and has a number of breaks in the chains. Whenever I run generate.inp CNS...
Dear All, Christine Ebel asked me to post this on her behalf. Interested candidates should get in touch with her (and not with me!) Fred. Job ad below: ...
... We run cns_solve_1.1 on our dual AMD64 RedHat Enterprise 3 linux cluster. As previously mentioned the "getarch" script fails to deal with the output of...
Hi- Hopefully someone out there has some advice/suggestions. We recently purchased a new Dell work station with the above version of Red Hat. The postdoc who...
There is Rapid-Access time available for PX beginning >RIGHT NOW< on NSLS beam lines. Also, the deadline for applications for the NSLS's Winter 2006 cycle is...
Dear all, I have installed CNSv1.1 in Fedora core 2.0. The installation was sucessful, but when I source the cns_solve env file in .bashrc, the program does...
Dear Marcel , I compile with the option -DINTEGER="long int" or -DINTEGER="long long int" and when I start cns I have a 'segmentation fault'. I use the gcc...
Hi, I try to install CNS 1.1 on a DELL POWEREDGE on RedhatLinux 4 ES EM64T version. I can compile the programm but when I start it I have the following ... ...
Hello, I am refining an X-ray structure of a calcium-binding protein at rather low resolution; since the calcium co-ordination distances are unstable during...
Hi, I'm working on a large structure (approx 3400 residues, two molecules in assymetric unit and 45 nucleotides DNA). At the moment I'm just building the DNA...
Dear All, Need help with finding an error in my ncs.def file. This file has been generated by me for an icosahedral virus. It has 1 group and 60 equivalence...
I'm doing some modeling experiments and I would be be interested to know if there would be a way to apply unit cell and space group parameters to certain...
Dear Colleagues, The Protein Crystallography Laboratory of Prof. Sung-Hou Kim at UC Berkeley has Nonius FR-591 diffractometer, two MAR image plate detectors ...
Dear all, I have two questions about b factor refinement and minimzation refinement. My crystal data resolution is 1.9A. After rigid body refinement and...
hi I am havin some problem during XPLOR installation.. 1. Edit ulogin.com in order to define the compiler (g77 or fort77) and the proper path for $XPLOR, and...
I would like to know is it possible in refinement using cns to relax the bond angles and bond lengths of a particular residue amongst other identical residues...
I compiled CNS1.1 in redhat9 by using g77install. But, when I run any input files, cns always gave " Fatal errors" about commands that had defined in cns...
Manager, Drug Information I am assisting to recruit a Manager, Drug Information for a biopharmaceutical company located in Bridgewater, NJ. Company They are a...
Hi, I am using ARIA 2.0 to compute a structure and am running into some problems. If I use the CNS libraries that came with CNS1.1, everything works fine...
is there a way to get a list of noe violations for a set of structures, showing which noes are consistantly violated etc.? I know there is a list of violations...
Try to install cns to sgi altix(itanium 2, rhe3). I make the change with the getarch script (add the intel-ia64-linux id). first try the command "make...
Second Call For Speakers Gordon Research Conference on Diffraction Methods in Structural Biology July 16-21, 2006 Bates College, Lewiston, Maine, USA ...
I have a question about the distance bounds produced by the mmdisg module in CNS. Starting with the trx_ example that is distributed with CNS, I stopped the ...
Dear Users, I want to do a energy minimization for trypsin-BPTI complex. I need to add 15 Cl- ions in positions of largest electrostatic potential and fix...
Trying to install cns1,1 on RHE3 (sgi altix 350, ) machine. Got the error below. Any help (as basic as possible) would be very much appreciated # make install ...
