Hi, I am new for NMVIEWJ. I just downloaded and installed the NMRViewJ on my PC with Linux system. I have two questions: 1) Why I have no dual strip...
Hi, I am wondering that can I resize the spectrum window to fit the spectrum. For example, I have a hsqc spectrum 1H from 6 to 10 ppm, 15N from 106 to 126 ppm....
hello group, does anybody have a python script similar to the peaktable (``pb'') command, only using data heights instead of volumes? i've tried to tweak...
... you can try the following (not tested) : # --------------------------------------------------------------------------- # def peak_field(self, assignment,...
Hi Markus, Unfortunately the unmodified peak table extension in Sparky 3.110 gives the same error you report when saving a file, and the list text has ...
Hi to all! I've finished the structure calculation of a protein and now work on its dynamics. Unfortunately I found it's fully anisotropic. As a newer, I don't...
Weir, Which program are you using to do the relaxation analysis. I haven't gotten into the full analysis of relaxation data yet, but others here in the lab...
... hi tom, ... gives ... aahhh ... i seem to remember that i asked you about this very problem coupla years ago ... sorry for my bad memory! ;) ... version. ...
... hi, ... same here. that's normal ... ... as josh pointed out, TENSOR is certainly an option. however, i prefer to do this kind of stuff on the command...
I'm currently running Sparky 3.112 on Windows XP. Would like to install new extensions into sparky but am having some problems. I copy the .py file into the...
Hi, I do not know of a how-to guide to install new Sparky Python extensions. I would not expect installations for Windows to be different from other platforms...
Hello and thank you for the response. All of the python scripts are located in the directory: C:\Program Files\sparky\python\sparky\ This is the sparky_init.py...
Hello and thank you for the response. All of the python scripts are located in the directory: C:\Program Files\sparky\python\sparky\ This is the sparky_init.py...
Hello, I've got a quick question. I've got my NOE build-up at different mixing times. I made the assignment at a 250ms mixing time with a particular contour...
Hi Fabian, If you fit a Gaussian to a peak in Sparky (default integration mode) then the peak volume is the entire volume under the Gaussian. Changing the ...
I haven't made this plot, but my approach would be to make sure that there is no significant fluctuation in the baseline, when considering setting the contour...
Josh, I think that makes sence. That can explain that there are some peaks due to overlap that cannot be intergeated with a guassian or lorentzian curve and if...
Hi All, I am new for sparky. I got a question. It is possible to change the spectrum window (frame) size to fit the spectrum size. For example, my HSQC has 4...
Hi Hanqiao, Sparky will not change the spectrum window size, but it can zoom so that the full spectrum just fits in the current window. This is called "zoom...
Hello again, I read in the discussion group that there are problems with sparky and Chimera, so Has anybody been able to solve it? Who has both programmes ...
I tried to get it working for several weeks without much success. It depends a lot on the versions of both programs and what Python libraries are installed on...
Hi Fabian, To make Sparky work with Chimera you need to use compatible versions of the two programs. Only very specific version combinations work. Also the...
Thank you Tom, What I didn't realise at the time I wrote my email (although I read the manual before I wrote my previous email) is that Chimera offers the ...
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