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chemistryfev4@...
Jun 5, 2006 7:37 am
153
Dear everyone, I am new in this group and I have one major problem with my dataset. If I use restricted peak pick for my hncoca spectra, utilizing my 2D HSQC...
Hi Lassalle, 1. Use 'al' and calibrate both spectra. 2. Reduce counter level in HNcoCA so than noise won't be picked. 3. Play with tolerance in 'kr' setting. ...
Thanks a lot for the advise, the method with choosing world and then peak picking seems to work fine. I will test it in more detail today. (This should work...
I am amazed that 'kr' didn't give you expected results. In case you are working with a unstable protein sample, like mine :(, where peaks get moved slightly...
Dear Mandar, as usual a very good tip with the 2D projections, but anyhow this is not the problem. I found that I have some very high intensity noise peaks and...
Dear Lassalle, I am glad it worked to your satisfaction. I was just wondering, while processing your data, did you happen to pay attention to the window...
Hi, After using 'Stip Plot' for long time, Sparky occasionally adds few strip entries under Windows menu as if independent view (View Name / Number). This...
Hi Mandar, I've never seen strip plot strips added to the Sparky "Windows" menu. That is a bug. I tried to make that happen but was not able to. I looked at...
Hi Thomas, Thanks for the technical insights. In few of my attempts to reproduce that behavior I found running orthogonal view 'ov' on any strip, then closing ...
Hi Mandar, Thanks for telling me the "orthogonal views" method of getting the strip in the Sparky windows menu. That allowed me to reproduce the problem and I...
... Hi Bradley, Yes I wrote some Python code to put in your sparky_init.py file to address this in March 2003. Unfortunately it has not been included in the...
Hi All, I just tried to install Sparky in my Macintosh. It seems I got trouble. When I click the Sparky 3.112, I have icon like Target with cross at the...
Hi All, I have two probelm about Sparky and hopefully someone could help me. the 1st one is I have difficult to install Sparky on my Mac notebook. I double...
Hi Hanqiao, One problem I have noticed is that if there is a space character in the path to the Sparky installation location then it does not start. The...
Hi Hanqiao, I'm still not clear on what happens when Sparky does not start. Does X11 start? Does the X11 icon (black X on white background) appear in the Dock...
Hi Tom, Thanks a lot for concerning my questions. First of all, my X11 works perfectly, I never get trouble with it. As I said when I double clicked on ...
Hi Hanqiao, Is there a space character in the Sparky installation path? I believe that prevents Sparky from starting on the Mac. If that is not the problem ...
Hi everyone, I am now a student in pharmacology at McGill in Canada. I have some 2-D data like fid,propar, log, text. I dont know how to convert these files...
Hi all, I have installed the sparky on my pc and tried to print some NMR spectra. It doesn't work properly. I don't know what is problem.. Are there anyone who...
Wenyong, if you installed in linux, just need to go a command line. It must be written in the manual how to use this command. I use bruker, and this is how...
Dear Sparky users, I am quite new to Sparky as a former user of XEASY and, if I manage to use more or less all the features for viewing assign and save the...
Dear Luca, ... I guess it's indeed some kind of hr/lf problem in the file, but you don't need to do peak copying in this way. Just select all the peaks in...
... Hi Henry, thanx for the reply ... Oh, ok ... thanx, but using this "ornament copy & paste" method I already got success ! :) But the real problem was in...
... probably hard return/linefeed dos/win text file lines end with '\r\n' (carriage return + newline) unix text files end with only newline. which implies...
Hi Eiso, you are pefectly right ... I also thought it was a problem related to my system (which is Linux SUSE 10.0 OSS in my workplace) because I have a WinXP...
... I generally just copy and paste to a new generated text file or convert it using the Editpad text editor.... There are also some more tools to be found on...
Hi all, I think the unnoticed problem with Luca's peaklist is use of non conventional resonance names for Sparky. It, according to me, has nothing to do with...
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