Dear everyone: Now I am analyzing HCCH-TOCSY and HSQCNOESY spectrum.I want to find the mirror peak to check the assignment.In the sparky manual,I must assign...
Hi Thomas, Your post below was very helpful to those of us that are not very command prompt savy. Thanks for that. My question is where does the file go...
Hi , If you just convert VNMR files to UCSF, you definitely need the phrasefile (like datdir/phrasefil) provided by NMR manager. Dont forget that you also need...
Dear everyone, I've been using SPARKY for a while and I am interested in using MARS is a program for robust automatic backbone assignment of 13C/15N labeled...
Hi Thomas, Eiso and Everybody out there, Does anyone know a trick or can suggest code for selecting negative data height peaks? Or sort the peak list, 'lt'...
Hi Dong, Provided you have peak picked evrything on your 3D, Sparky's powerful strip plot 'sp', should be able to sense your mirror peak when you ask it to do ...
... Hi Wenyong, According to me, your X-11 for windows will only allow you to visualize nmrDraw installed and remotely executed on Unix or Mac. I read about a...
... Hi Dustin, The spectrum settings dialog (st) lets you set the noise value for a spectrum that will be used in computing signal / noise. It also allows you...
... there are several clumsy ways. 1. write out a peaklist with data heights, remove the negative peaks in an editor, and read in the peaklist again (and...
Wow! That was a wonderful reply. Thanks. I generally do it similar to your suggestion 1 and yesterday did spent lot of time trying a work around relevant to...
Thank you so much Mandar. I will read and try. I gratefully acknowledge your reply. SM ... mars+&submit=Search&charset=UTF-8 ... using MARS ... Institute ... ...
Hello all, I installed sparky 3.110 on my linux PC recently but when I try to use sparky with python, I cannot use hot keys (ie keyboard does not work in the...
Have you set Sparky's bin folder in your path? You might have noticed that the sparky shell script in that folder checks and does the environment settings...
... data ... heights (I ... I needed to do this exact same thing a few years ago, and wrote a small function to do it. (I wanted to be able to easily 'alias'...
I'm very new to sparky and linux. The sparky works great in Windows, but I tried to install it in linux so that I can run both sparky and nmrpipe to integrate...
Hi Chenfeng, I see that libstdc++.so.5 is not included in Sparky 3.110 so it won't run on newer linux machines that omit this library. I suggest getting the...
Thank you, Mandar. The version of Python in CentOS 4.2 is 2.3.4. Anyway, Sparky works fine in another linux (same CentOS) PC in my laboratory but does not work...
Hi Monika, How to set the SPARKYHOME environment variable depends on what operating system you are using. On Windows you use Control Panel / Performance and...
Hi Fabian, The trouble is that your file of CORMA simulated peak intensities does not have the right format. Here's the format as described in the Sparky...
sorry if you have the same email twice, but I haven't gotten a copy of in my email account :P ... Hello, I'm trying to simulate an NOE spectrum using CORMA (cx...
Hi all It's bin a long time since I got some help from you guys.! Recently, I'm now ding NOE assignment using sparky I want to do it by comparing with some...
Hi Byoungkook Kim, I used Google to look up "cannot restore segment prot after reloc" and found a number of articles about this. It is related to new security...
Hi Tom, I have the same problem with sparky installation on Fedora core 5. Although I tried to use some commands as you suggested but still could not get...
Aloha, I had success on FC5 system by typing the following in the directory which contains the Sparky installation (ie, /usr/local/sparky): find . -name "*.so"...
Hi Sparky Users, How does one integrate diagonal peaks in 3D HNHA spectrum in SPARKY. When I try to do it by Gaussian fit method and default settings, the ...
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