Hi, I had Sparky up and running under an earlier version of Redhat Fedora, however, I've now upgraded to Fedora 5 and I'm getting the following error message...
Hi, I have several hsqc lists and I want to measure the ratios and error ranges of two selected HSQC peak lists. I only found Sparky provides script to obtain...
Hi Jack, There is something relevent on Art Palmer's website http://cpmcnet.columbia.edu/dept/gsas/biochem/labs/palmer/software/nmr2modelfree.html Although its...
Hello All, Apologies if this problem has already been covered, but for some reason I am able to search through yahoo group archives only intermitantly today....
Hi John, I believe NMRDraw displays the contours using exactly the same method as Sparky. So the only explanation of the differences you see is that the...
Hi, Sorry but I haven't understood...why don't you put the visual plan just a little bit higher? In this way you see only strong signal, and the noise is under...
Usually, we adjust the phases of our spectra correctly in NMRDraw, and then display the spectra in Sparky. We sometimes find that the phases require slight...
I believe that if you need to adjust the phasing between NMRDraw and Sparky, then you are not phasing your spectra completely correctly. I do not think that...
sparky and NMRDraw should display the same data, so there should be no difference in phase between data displayed with sparky or NMRDraw. not all spectra are...
Hello gentleman, I have found 2 problems with sparky ... problem 1............. I recently created a file (chem. shift list)from sparky in XEASY format (xe)...
Dear PP, Concerning problem 2, it's probably only the additional 0 at the end; edit a line (nr. 234) in the xeasy.py script (...\sparky\python\sparky) to: ...
Hello again....thanks for your prompt reply ....as you can see below that fix created other problems and now on xeasy peak list there is only: "number of...
Hello PP, It seems to be necessary to adjust format, if you change values to add 0 at the end of each lines. ... format = '%4d %s %1d %1s %9.3g %8.2g %1s %1d...
Hello all, thanks for your inputs..indeed thats a good help. there is still some things are not right ... #modified: format = '%4d %s %1d %1s %9.3g %8.2g %1s...
Hello guys, could you please take a look below ...there is several errors when using aria2 --convert conversionexample.xml thanks Example of my file SPARKY NOE...
Hello all, I have the following error when converting the project in Ariaé.0, and that comes from the ssignments in Sparky. ........................ File...
Dear Colleagues, I would like to invite you all to participate in a new online information and advice forum for researchers working in biomolecular NMR ...
Dear all, I have just found that the link to SourceForge sparky scripts is broken. This is Andrew Perry's collection of Sparky extensions. I was wondering if...
Hi Vitaliy, Have you been to: http://sparkyscripts.cvs.sourceforge.net/sparkyscripts/sparkyscripts/ 'Select_peaks.py' is available there. Hope Andrew is still...
Whoops, sorry I missed your message ... just catching up on some email. Glad you found the scripts in the end. I've been meaning to clean up those scripts and...
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Dear all, when I try to export the peaks of a N15 NOESY-HSQC in DYANA/XEASY format, the output is a bit different from the required one (see below). Although I...
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