Usually, we adjust the phases of our spectra correctly in NMRDraw, and then display the spectra in Sparky. We sometimes find that the phases require slight...
I believe that if you need to adjust the phasing between NMRDraw and Sparky, then you are not phasing your spectra completely correctly. I do not think that...
sparky and NMRDraw should display the same data, so there should be no difference in phase between data displayed with sparky or NMRDraw. not all spectra are...
Hello gentleman, I have found 2 problems with sparky ... problem 1............. I recently created a file (chem. shift list)from sparky in XEASY format (xe)...
Dear PP, Concerning problem 2, it's probably only the additional 0 at the end; edit a line (nr. 234) in the xeasy.py script (...\sparky\python\sparky) to: ...
Hello again....thanks for your prompt reply ....as you can see below that fix created other problems and now on xeasy peak list there is only: "number of...
Hello PP, It seems to be necessary to adjust format, if you change values to add 0 at the end of each lines. ... format = '%4d %s %1d %1s %9.3g %8.2g %1s %1d...
Hello all, thanks for your inputs..indeed thats a good help. there is still some things are not right ... #modified: format = '%4d %s %1d %1s %9.3g %8.2g %1s...
Hello guys, could you please take a look below ...there is several errors when using aria2 --convert conversionexample.xml thanks Example of my file SPARKY NOE...
Hello all, I have the following error when converting the project in Ariaé.0, and that comes from the ssignments in Sparky. ........................ File...
Dear Colleagues, I would like to invite you all to participate in a new online information and advice forum for researchers working in biomolecular NMR ...
Dear all, I have just found that the link to SourceForge sparky scripts is broken. This is Andrew Perry's collection of Sparky extensions. I was wondering if...
Hi Vitaliy, Have you been to: http://sparkyscripts.cvs.sourceforge.net/sparkyscripts/sparkyscripts/ 'Select_peaks.py' is available there. Hope Andrew is still...
Whoops, sorry I missed your message ... just catching up on some email. Glad you found the scripts in the end. I've been meaning to clean up those scripts and...
members have full, unrestricted access to the site for the period of their membership. We do not charge to download the free listed on this site (even when we...
Dear all, when I try to export the peaks of a N15 NOESY-HSQC in DYANA/XEASY format, the output is a bit different from the required one (see below). Although I...
Hi all, I have been using successfully the mirror peak assignments checking tool. It is very useful for the NOESY spectra assignments to derive constraints for...
Hi Evangelos, Here's a trick to use the mirror peaks tool with two C13-hsqc-noesy spectra (aromatic and aliphatic). Copy all the peak markers in the aromatic...
Thank you Tom, I followed your advice and tried the trick of merging the spectra. But instead of creating a huge file spanning from the aliphatic to the ...
Dear Sparky Users, 1. I have analysed all the backbone and sidechain peaks using backbone and sidechain experiments. 2. I analysed 3D 15N-NOESY and created...
Hi Please open both 13C and 15N spectra in the same Sparky session. If you haven't manually assigned NOESY, please also load your resonance list using 'rl'....
hi, open the project which contains all the sprctrums (have been assigned) type rl then save as *.shifts,maybe you need have a check. for the noesy spetrum,...
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