Dear all, We can use other automatic NOE assignment programs [such as CANDID (from ETH, Zuich) , SANE (from Scripps)] to speed up the process of NOE...
HI Liwen, Sparky reads extra column in the peak list as user note. If you add fifth column say "CAN" or SAN", then you should be able to display that on the...
Hi Liwen, When you use the "read peaks" (rp) command the peak markers created on the spectrum are selected and you can use the color ornaments (cr) command to...
Hello all, i'm just curious. I open Sparky, load a project, and after some work or not, i decide to delete a peak. So i select the peak(s) and hit the del-key....
Dear Tom Goddard and Mandar Naik, Thank you very much for your timely reply! Now, I can color the peak labels (not peaks) differently according to the peak...
Hi Markus, I'm not sure why deleting a peak in Sparky for the first time takes a few seconds on some machines. On a Mac OS 10.4 with Sparky 3.112 and about...
Hi Liwen, Here's some Python code you can put in your Sparky directory to add a shortcut "lS" that selects all the peak labels for currently selected peaks....
Hi all, I'd like to create a simulated NOE spectrum using cx command but when I try to run the simulation I have this message in the "Create Corma Spectrum"...
Hi Marianna, The CORMA Spectrum command (cx) unfortunately does not work on Windows. It should work on Linux or Macintosh computers. It needs to run a...
Hi Tom, thanks for your reply. To be honest, it doesn't really bother me that much; i was just curious what could possibly be a reason ... Didn't think of ...
Hello all, I've been trying to save a sparky project with a different name in order to do some changes in the new name project...but all the changes are as...
Hello, Sparky actually saves most of its information in the save files, not the project file. When you save your project as a new name, it points to the old...
Thanks...thats what I did actually, but I just wanted to make sure that Sparky did not had a way of doing that automatically ....as example it could save the...
I made a new Sparky version (3.114) that works on Windows Vista (and XP) available on the Sparky web site. http://www.cgl.ucsf.edu/home/sparky/ Earlier...
It seems like cch-tocsy is not supported by spin graph assigner(shortcut ga), so i mannually assigned the side-chain carbon atoms using cch-tocsy. But after...
The spin graph assigner (ga) will use your side chain carbon resonance assignments obtained from cch-tocsy or by any other means. I suspect it is not working...
Dear sparky users, I use cyana to automatically assign noesy spectrum. I create a sparky readable peak list after running cyana. And the list contains ...
... that's how rp works. what you could try as a workaround is copy the assignments from cyana to the original sparky peaks (with your integration) open a...
Dear All, We have a new dual-core laptop in the lab that will be running linux and Sparky. I would like to know if it is possible to install Sparky in such a...
Hi Afonso, There are no special installation settings for Sparky. It is a single threaded application so it will only use one core. But it uses X windows for...
I think that you can set an alias for the pipe2ucsf command. Please check it out that in the shell environment variables the alias pipe2ucsf is properly set to...
I want to prepare NMR pictures using Adobe Illustrator but I think I am doing it not correct since I cannot open the pdf file I save on sparky on Adobe...
Saving to PS is very simple in sparky. In the main sparky window choose File/Print, set your axis and options as desired, then click on the "Save..." button...
... pt [print, also in the file menu] print , but also allows to save as a ps file. many linux systems have ps2pdf , try that if you want to create a pdf. ...
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