Hi, Sparky always hangs for few seconds when we do any deletion for the first time and this happens only in unix and not in windows, can anyone suggest a way...
Hi Karthik, This was discussed on the mailing list before. http://tech.groups.yahoo.com/group/nmr_sparky/message/399 I vaguely recall thinking the pause...
I would appreciate if any sparky user can tell me how to save the strips of 3D experiment. When I save the whole project, close it and when open again all...
Hussan, Syed (NIH/NID...
hussans@...
Oct 20, 2008 4:48 pm
534
Hi Syed, Unfortunately Sparky does not save strip plots in session files. Strip plots were added at about the time that funding for Sparky development ended...
Hello, I was wondering whether anyone has had experience with the XPLOR format extension (xf). For me, it works as billed for my 3D-NOESY, but I cannot get...
Hello all, I would like to write a Python script, that will open multiple 2D spectra, set contour level and zoom them out, so that each spectrum will fill the...
Hi Krzysztof, How about using python code session.command_characters('zf') You could do that after opening each spectrum. There unfortunately is not a simple...
Hi, I'm wondering does anybody use 'xf' in sparky to generate an xplor formatted distance restraint list. I have my 2D CC spectrum with proper assignment. I've...
I have couple of questions regarding sparky: 1-Is it possible to export the chemical shift table in the format compatible to PIPP.COM software after having...
Hussan, Syed (NIH/NID...
hussans@...
Nov 20, 2008 6:44 pm
540
Hi, In sparky, try to type "rl" or "tb" or "lt", any of them would show you a list and could be saved as a separate file when you assign the peak ("at"), there...
Dear all, a simple (I hope) question: it is possible to change the black color of the screen in a different one, white for example? I have a titration with 8...
Many many thanks!!! It does not seems difficult. Thanks again, Marco ... Da: Thomas Goddard <goddard@...> Oggetto: Re: [nmr_sparky] background color ...
Hi every one. I have a very small question, how to calibrate a spectrum in SPARKY with reference to peak of internal reference molecule like TSP. I could not...
Hussan, Syed (NIH/NID...
hussans@...
Dec 5, 2008 9:58 pm
545
 Hi Syed,  st command is what you need...  Bye Marco ... Da: Hussan, Syed (NIH/NIDDK) [F] <hussans@...> Oggetto: [nmr_sparky] how to calibrate...
Hi recently I have upgraded my linux system form fedora 9 to fedora 10 everything was OK but while I'm using sparky in fedoar 10 typing was not possible in...
Hi Jong, I'm guessing your problem has to do with your language setting in Fedora. Perhaps you have it set to Korean. This may be sending to Sparky unicode...
Thanks for your kind reply Tom but in Fedora 9 even when I use sparky in Korean language setting there was no problem and in fedora 10 both english and korean ...
Dear Sparky users. Just a general question. How most of the people assign aromatic residues? Is there any 3d experiment in bruker's library for the assignment...
Hussan, Syed (NIH/NID...
hussans@...
Jan 26, 2009 10:07 pm
550
... Hi Philip, You've tried the two available options. Probably the photoshop on the postscript image gives colors that are not as bright as in Sparky windows...
Hello Forum, Is there a good way of getting the HSQC images from sparky maintaining the resolution and keeping the brightness for poster/publication. Also I...
I am facing a strange problem. I have made assignment of a protein using sparky. When I open a project containing around 8 spectra and look at assignment table...
Hussan, Syed (NIH/NID...
hussans@...
Feb 3, 2009 11:29 pm
553
... do you use non standard residue names? could be a reason. could you show resonance and/or peak lists at a point that things are still ok according to you. ...
Hi, I want to use relax.py (rh command) for T1 calculation. However the a*exp(b*t) model is not exactly right for T1, so I want to modify the python code for...
Hi Asli, I have modified relax.py for other functions in the past and it does work. One problem with your code is that the parameter_count() routine should...
Hi, Thanks for the help. Now I can get nice fits. I changed the model to a*exp(b*t)+c, and it understood this equation better, for some reason. Now I get good...
Hi Asli, The code assumes that the second fitting parameter (b if you have a,b,c) is the exponent coefficient for purposes of computing the time constant....
Hi, I just re-installed NMRPipe on my macintosh (it was expired). Sparky has been on the mac and is working fine when it come to looking at spectra. However,...
Probably just go back to your cshrc file and give it the path for pipe2ucsf. Also, nmrpipe won't ever expire if you set this environment variable setenv...
Having problems with message search?
Fill out this form to ensure your group is one of the first to be migrated to the new message search system.
