Thank you for your comments but DQF-COSY is not my case :-) I certainly use phase-sensitive cosy data but I am still quite hopeless about the diagonal...
HI Everyone I have discovered that when I use ssh for parallelisation with nmrShell eg. as follows nmrShell -rsh ssh -par pipe.net -sh nmr1.com -path ...
Hello nmrpipers. I am a new user of nmrpipe and I'm trying to work up a simple 2D H,H NOESY from bruker 500 AMX (Avance). I'm having a trouble with processing,...
Huzzah!!! If the aquisition mode is "DQD", then this is DMX format (digital) data, not AMX. The other clue is the fact that there are values for "-decim" and...
I want to process some crinept data acquired on a varian spectrometer. The header in the pulse sequence file of crinept.c indicates that the data should be...
I had to process crinept once and I used something like the IPAP script
in the nmrpipe sample data. It seemed to do the trick, but someone else
out there may...
A special macro is probably not required; there is already an NMRPipe COADD function which can combine points or vectors ... NMRPipe Processing Function COADD ...
Hello everyone, As a nmrPipe new user, I would like to know how to inetegrate 2D spectrum using nmePipe. I know by some other programs like Felix, you can...
Thanks very much to the 3 people who replied to my last email. Unfortunately, being a bit new to nmrpipe I still can't quite make anything work! Using the...
MY O MY!!! ... That's impressive!! When a QMIX coefficient is specified as two numbers seperated by commas, it is treated as a complex value. So, the cList...
.............................. Dr. Valerie Booth Assistant Professor Memorial University of Newfoundland Department of Biochemistry and Department of Physics...
Valerie Booth
valerie@...
Aug 5, 2005 1:46 pm
1016
Try something simple. I don't think you need to dotwo different conversion files. simple conversion script #!/bin/csh var2pipe -in ./fid -noaswap \ -xN...
Thanks very much indeed to Frank Delaglio, Shaheen Shojania and Srinivasan Chandra Shekar for giving me so much help with this. This script below given me by...
Hi All, I am trying to extract a set of 1D's from 2D spectrum, in order to integrate the peaks of these individual 1D's. I searched for specific functions to...
Dear everyone, I have one ct-cosy H-H spectrum. I want to extract the dipolar couplings. And so what I need is the ratio of the internsity of autopeaks and...
Dear Jiang Hong, Maybe you can use the software Sparky to fulfill your goal. The software Sparky can do the integration and peak picking et al. You can...
Dear all, I had run a HNCA expt. for my protein with watergate (states-tppi in both dimension).In the xwinnmr processing of the xz plane (H-Ca) plane, only...
hi,friends, I want to get the dipolar couplings of carbohydrates. Sounds like ACME is a good tool to extract the dipolar couplings. The questions here are: 1....
Hi, Try contacting either Daron Freedburg at the FDA daron_freedberg@...; 1401 Rockville Pike, HFM-419 Rockville, Maryland 20852 Phone (301) 496-0837 or C....
Joseph J Barchi Jr
barchi@...
Aug 12, 2005 9:12 pm
1024
Greetings everyone, I recently switched to OS X and I get some odd bugs when running Draw. For example: 1D spectra show a "cloud of dots" around the whole...
Indeed, I've heard from elsewhere that OS X 10.4 seems to offer some problems for use of NMRDraw. Now, I ordered a version of OS X 10.4 to debug this problem. ...
When we use "readROI" to extract the 1D summation projection of a 2D region. The output is *.dat. We can open *.dat with nmrDraw. Can we apply a Gaussian or...
Hi, I have installed NMRPipe on a Sun Ultra 10 running Solaris 8 and was going through the installation tests. Everything went fine except for "man nmrPipe"....
Hi Que, Could the permissions on /tmp be wrong? You should have read and write access to that directory. That's my best guess. Geoff ... Geoffrey Armstrong,...
Geoff, Thanks for the reply. Tim Burrow gave me the same suggestion and it fixed the problem. I didn't know about "sticky bit" either until he pointed them...
Dear Friends ... We just posted a new version of the software, which might work a little better for those folks using Mac OS X 10.4 ... -f "the magic piper of...
I have recently been trying to install the new nmrpipe on my mac and when I run install.com it gives the error that the nmrpipe.mac.tar.Z file is not in gzip...
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