Dear friends I am new to this community and also new to this nmrpipe.i installed nmrpipe in Suse10.0.if i give bruker command,i am getting error. I dont know...
Dear All, I have a acquired a 2D NOESY using 1364x800 points. I am able to process the data in vnmrj, but it gives a size error when I try to convert it to ...
Dear Roberto, I would first check the log file to make sure your 2D experiment did complete, i.e. all 800 fid were recorded. I would guess that it stopped ...
I'll bet Yves is absolutely right. Typically when I see this error it's due to a "FIFO underflow" or manually halted experiment. The log file in your...
I am just curious: let's say, for a 2D experiment, we recorded 800 fid, bur for some reason I only want the first 400 fid. How can I do that? I tried to edit...
hello, thanks for all replies to my previous question. By the way, varian Biopack brings the possibility to record several experiments using projection...
dear all, I am using "view2D.tcl " to overlay two 2D spectra. I ahve several questions: 1. can I export the overlayed spectra as a .ps file? 2. can i turn off...
You can use the tcl script plot2.tcl which should be in your nmrpipe/com directory. You will have to: change the file paths for the two data sets; change the...
We recently installed Topspin 2.0 in our lab and are trying to take advantage of some of the Bruker experiments that we have never done before. However, the...
One problem with your script is that you perform and LP during while the third dimension remains to be processed. Because most N15-edited experiments in the...
I created a modified version of view2D several years ago that in addition to the normal controls has a plot button at the top. It will create a postscript file...
You could turn off the negative peaks by setting "Minus" to be 0. You should find "Minus" button on the top of nmrDraw window. This works when one spectrum is...
I am curious as to the status of FDM in NMRPipe as well. I have recently come across the articles and work on improving the digital resolution offered by FDM....
First one here for me and probably a stupid one but I hope someone can help me. I wish to convert the above mentioned dataset from a Bruker DRX spectrometer....
Hi, I ran a 4D 13C-HMQC-NOESY-15N-HSQC on a Varian Inova600 using the pulse sequence gChmqcnoesyNhsqc and I am trying to process it up using nmrpipe. Before...
Ok, don't despair ... for cases like this, we have a script called "varAdjust.tcl" which allows us to re-order the arrangement of real and imaginary data (see...
delaglio@...
Jun 6, 2007 12:57 pm
1493
Thanks Frank! as usual, you're right on - your script worked like a charm and we were able to process up the 4D experiment by first using the command: ...
Dear nmrPipe users, Every time I try to display a 1D spectra with nmrDraw, I can see lots of small dots scattered about the spectra line (I attached a...
Hello Greg, Those points are real spectral points, they are the maxima or minima of a sharp line in the spectrum. The reason for this is that: when there is ...
Hello Mumdooh, Thanks for your quick answer. You were totally right! I zoomed as you suggested and the points vanished away. Thank you for your help Greg...
Hi I am trying to use ACME to extract J couplings from a data set. I have succeeded in obtaining a spectra with and without the diagonal as described in the...
... Hi The computer gives me the following error during the running of acme.com of the fit routine: M Error: Array length out of bounds: xR Near line 203 of...
wow, that sounds serious! if the following suggestions don't work, contact big FD directly ... 1. make sure that the data were converted and processed on the...
delaglio@...
Jun 19, 2007 5:41 pm
1501
I have been using ACME extensively over the last several months. Can you be more descriptive about what you mean when you say "nothing happens." You don't have...
I recently collected a 4D -NOE and there are few fids with an ADC overflow error, resulting in some ugly artifacts. Does anyone have a general procedure for...
Hi Geoff, What I've done in the past is process the first dimension and then find the bad planes and use LP in the second dimension to fix the bad fid (without...
Hi I finally got everything to work fine with ACME after observing that the error was connected the size of an array.... It seems as ACME may have an error...
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