Hi i upgraded linux system to fedora 7. and i have a problem with lauching nmrDraw. when I try to start nmrDraw, error message like " nmrdraw: error while...
Hi group!!! We are having problem with processing ghnco_Jncoca_3DS spectra. We have been trying for so long to process this spectum as 3D, but no success so ...
Hi Nataliya, Could you give us a little more information... like your conversion and processing scripts and your phase(2) arrays. It will make helping a bit...
Hi Michael, I ran the following 3D experiment (ghnco_Jcoca_3DS3, pulse sequence is from P. Permi, P.R. Rosevear and A. Annila, J. Biomol. NMR, 17, 43-54 ...
Dear All, NANUC would like to announce the 2008 NMR BootCamp. This year we've been invited down to the University of Connecticut (hosted by Dr. Jeff Hoch) and...
Hello all, I have run an 15N-1H NOE difference HSQC (hsqcnoef3gpsi) on a Bruker 500 Avance system running TopSpin 1.3 software. It appears that both data sets...
How do I get autoFit.tcl to output estimated volume fit error? I'm looking for a parallel with the estimated height fit error DHEIGHT, but I can't find one in...
Hi everyone I am trying to process protein relaxation data using NORMAdyn. But the way NORMAdyn calculates errors is throwing me off. Is there a reference to...
nmrPipe has features for relaxation data analysis, included as a tar ball from the ftp distribution. an alternative might be CurveFit, available from Art...
Hello All I have been using TALOS with my assignment data and have encountered problems when trying to compare my data with a known pdb structure. I have been...
Yes,I want to tilt the old-style J-resolved 2D spectra. I solve this problem by pipe2txt.tcl to converse the data to .txt file, and then use octave to shift...
There is a macro shear.M in the $NMRPipe/nmrtxt directory. It is quite straightforward and you should be able to modify it to your needs. Cheers, Pedro...
I am a new user of NMRpipe. When I processed a 15N-noesyhsqc 3D experiment it looks folded. I could not find the apparent reason for this. Can any one help me,...
Hussan, Syed (NIH/NID...
hussans@...
Mar 4, 2008 10:25 pm
1694
If a dimension is reversed, use "FT -neg". If a dimension has the first and second halves rotated, use "FT -alt". In some cases, especially for 13N noe data,...
I have recently installed NMRPipe on my Intel iMac running OS X 10.5.2 and have so far observed only a couple of problems. 1. The purple border is grey. 2....
Joe, For point 2 check out this previous post... http://tech.groups.yahoo.com/group/nmrpipe/message/1338 Specifically, you will need to execute the two...
I'd like to change my synthetic peaklist using the updateTab.tcl script. I'm not certain of the format for the -list/-data file that I'm assuming includes...
I am writing here to see if anyone else has noticed a discrepancy between O2P value calculated for NMRpipe processing of 3D spectra and the acquisition values...
Hi, It seems that you have to adjust post-acquisition the 13C frequency by about 2.3 ppm in order to correspond to Wishart and Sykes. Why doe Bruker calculate...
Virgil Simplaceanu
vs2a@...
Mar 14, 2008 12:29 am
1701
Hie Massimiliano! In many triple resonance experiments such as HN(CO)CA and HN(CO)CACB, there is a frequency list (fq2) to switch the 13C carrier from CO to CA...
Hi, In the Bruker standard spectrometer configuration, the 13C frequency reference is that of TMS, this is about 2.66 ppm downfield of DSS (see for example...
Hi, I got a very old varian noesy pulse program. "noesy with variable d1 delay to match em filter". It's said to be able to reduce the total experimental time....
I'm trying to swap the order of dimensions for processing with another application. I have a 4D noesy collected as: 1 2 3 4 H_Acc H_Don X_Don X_acc and I want...
HUZZAH!!! Greetings, colleagues. The various xyz2pipe/pipe2xyz flags -y -z -a do indeed re-order the data, not simply adjust the header. So also do the...
Dear nmrpipe group, When I process the experiment HMBC (pulse sequence "hmbcetgpl2nd"), acquired in Magnitud Mode. I get the expected spectrum but twice in...
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