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nmrpipe · Information on use and features of NMRPipe, the system for multi-dimensional NMR spectral processing and analysis.
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Messages 1788 - 1817 of 2007   Oldest  |  < Older  |  Newer >  |  Newest
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1788
Dear All, I have a 3D double sensitivity enhanced hcch-tocsy acquired on Varian. So far I have been processing the spectra using: var2pipe -in ./fid -noaswap...
michal.respondek
michal.respo...
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Oct 2, 2008
5:35 pm
1789
Have you tried selecting Rance-Kay for ­yMODE and using the ranceZ.M macro, e.g., var2pipe -in ./fid -noaswap \ -xN 1024 -yN 160...
DeRose, Eugene (NIH/N...
derose@...
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Oct 2, 2008
8:08 pm
1790
I have tried that one, it is exactly the one from the NANUC library. Still no improvement, but anyway Thank You Eugene for replying. ... macro, ... 128 \ ... ...
michal.respondek
michal.respo...
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Oct 2, 2008
9:58 pm
1791
Hi All, I get a segmentation fault when trying to use nmrWish under Mac OS 10.5.5 (using a freshly downloaded copy of NMRPipe): $ nmrWish Segmentation fault Is...
Douglas Kojetin
envirodug
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Oct 4, 2008
9:12 pm
1792
As I am not quite sure if my previous message has been sent I send it again. Sorry if it comes twice. ... Dear All, For an HSQC (Bruker) the bruker GUI...
feher_krisztina
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Oct 4, 2008
9:13 pm
1793
Dear Krisztina, Make sure you have the latest version of NMRPipe. I had this error when going to Topspin 2.0 while using an obsolete version. Problem went...
Yves Aubin
yves_aubin
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Oct 5, 2008
4:07 pm
1794
Hi, I would like to know whether anyone knows about a linux/mac programme/script which can convert .dat format file obtained from an omega spectrophotometer...
susmita_b
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Oct 5, 2008
6:26 pm
1795
Dear Kristina I don't know if anyone else has replied before now, but the problem is that you do not have the latest version of nmrPipe, the version you have ...
rharris@...
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Oct 5, 2008
9:48 pm
1796
No problem on my machine. Which X11 are you using? I'm running XQuartz 2.3.1 xorg-server-1.4.2- apple 17 R On 4-Oct-08, at 12:22 PM, Douglas Kojetin wrote: Hi...
Ryan McKay
ryan_nanuc
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Oct 6, 2008
5:45 pm
1797
Hi there, What is the seqfil you're using? e.g. ghcch_tocsy or ghcch_tocsyA? R On 2-Oct-08, at 3:57 PM, michal.respondek wrote: I have tried that one, it is...
Ryan McKay
ryan_nanuc
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Oct 6, 2008
5:45 pm
1798
From X11.app > X11 > About X11 Xquartz 2.1.5 - (xorg-server 1.3.0-apple22) (2.1.5) How did you obtain the newer version? Thanks, Doug...
Douglas Kojetin
envirodug
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Oct 6, 2008
6:39 pm
1799
... http://xquartz.macosforge.org/trac/wiki -b -- Ben Eisenbraun Structural Biology Grid Harvard Medical School http://sbgrid.org...
Ben Eisenbraun
bpeisenbraun
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Oct 6, 2008
7:05 pm
1800
Hi, the seqfil we used is ghcch_tocsy. Though It would be interesting to see the processing scripts for both of the seqfil....
michal.respondek
michal.respo...
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Oct 7, 2008
10:43 am
1801
Hi there, Take the 3D script from the NANUC NMRPipe script library and try this for the fid.com It was contributed by Tara Sprules (Eastern Canadian NMR...
Ryan McKay
ryan_nanuc
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Oct 14, 2008
5:51 pm
1802
Dear all, I'd like to know what is wrong with my fid.com script to process 4D 15N-15N NOESY spectrum. I got a strange spectrum after executing the fid.com...
ysosuke
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Oct 15, 2008
1:23 pm
1803
Dear all: I recently collected a CCH-Tocsy and a (4D) 13C,15N-edited NOESY .For the CCH-Tocsy, I got the test%03d.fid(test011.fid-test060.fid) with the...
virus4126
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Oct 16, 2008
11:24 am
1804
Dear Yu, Could you send or show me your fid.com script for 4D 13C,15N-edited NOESY, if you don't mind? I just posted an issue on the fid.com script for 4D...
ysosuke
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Oct 16, 2008
9:16 pm
1805
The manual page for LP has some notes about how to fix bad data. In the case of bad planes in a 3D, one approach is to transform the first two dimensions, then...
Frank Delaglio
bigfdelaglio
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Oct 17, 2008
3:40 am
1806
Hi, Some tips can also be found in the last two sections (6.8 and 6.9) of the following page : ...
Sébastien Morin
sebastien.morin.1@...
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Oct 17, 2008
1:43 pm
1807
Hi everyone, Installation of NMRPipe should be simple, but I am having some issues. I downloaded all the necessary files (NMRPipe.tar), I am running a c- shell...
dr_domincanchick
dr_domincanc...
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Oct 17, 2008
7:07 pm
1808
We took a series of 2D spectra for a t1 relaxation on a Bruker Avance 800. Each one has its own directory. I am trying to write a script that will open,...
nkjvcjs
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Oct 30, 2008
10:56 pm
1809
Your version of the script seems to mix two cases, one where each tau value is in a seperate experiment, and the other where all tau values are interleaved in...
Frank Delaglio
bigfdelaglio
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Nov 1, 2008
1:40 am
1810
Hello all, I recently installed nmrPipe on a Mac running OS 10.5.5 and X11 (Xquartz 2.1.5 - (xorg-server 1.3.0-apple22) (2.1.5)), and everything seemed to go...
kristie_1213
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Nov 3, 2008
9:18 pm
1811
All Hail Kristie, HUZZAH!!! Thanks for sharing, this is very handy. f...
Frank Delaglio
bigfdelaglio
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Nov 4, 2008
1:30 am
1812
I'm trying to use nmrDraw on a remote machine, while displaying locally. Both machines run Scientific Linux. Opened spectra are displayed (only after 'draw')...
eisoab
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Nov 10, 2008
2:58 pm
1813
Check that the remote machine is set to 24-bit TrueColor; 16 or 32 bit might be a problem. Also, try a different window manager, at least as a test; sometimes...
Frank Delaglio
bigfdelaglio
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Nov 10, 2008
8:43 pm
1814
... I've seen this when there is an invalid RgbPath specified in the xorg.conf. Xorg generally has safe defaults for settings like that, so I comment it out on...
Ben Eisenbraun
bpeisenbraun
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Nov 10, 2008
8:55 pm
1815
Hi all, I am a new user of nmrDraw. I am trying to process my .fid using the basic 2D macro. Everything goes fine but I am seeing doublets (two peaks stacked...
swati_sbt
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Nov 13, 2008
8:15 pm
1816
... -xN 2048 -yN 220 \ -xT 1024 -yT 110 \ -xMODE Complex -yMODE Complex \ -xSW...
shi_yanhong
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Nov 14, 2008
11:44 am
1817
Thanks! I have comments about the suggested scheme, though: 0. This scheme sends the FID data directly to a processing pipeline. This use is correct. However:...
Frank Delaglio
bigfdelaglio
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Nov 14, 2008
1:44 pm
Messages 1788 - 1817 of 2007   Oldest  |  < Older  |  Newer >  |  Newest
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