Dear All, I have a 3D double sensitivity enhanced hcch-tocsy acquired on Varian. So far I have been processing the spectra using: var2pipe -in ./fid -noaswap...
1789
DeRose, Eugene (NIH/N...
derose@...
Oct 2, 2008 8:08 pm
Have you tried selecting Rance-Kay for ÂyMODE and using the ranceZ.M macro, e.g., var2pipe -in ./fid -noaswap \ -xN 1024 -yN 160...
1790
michal.respondek
michal.respo...
Oct 2, 2008 9:58 pm
I have tried that one, it is exactly the one from the NANUC library. Still no improvement, but anyway Thank You Eugene for replying. ... macro, ... 128 \ ... ...
1791
Douglas Kojetin
envirodug
Oct 4, 2008 9:12 pm
Hi All, I get a segmentation fault when trying to use nmrWish under Mac OS 10.5.5 (using a freshly downloaded copy of NMRPipe): $ nmrWish Segmentation fault Is...
1792
feher_krisztina
Oct 4, 2008 9:13 pm
As I am not quite sure if my previous message has been sent I send it again. Sorry if it comes twice. ... Dear All, For an HSQC (Bruker) the bruker GUI...
1793
Yves Aubin
yves_aubin
Oct 5, 2008 4:07 pm
Dear Krisztina, Make sure you have the latest version of NMRPipe. I had this error when going to Topspin 2.0 while using an obsolete version. Problem went...
1794
susmita_b
Oct 5, 2008 6:26 pm
Hi, I would like to know whether anyone knows about a linux/mac programme/script which can convert .dat format file obtained from an omega spectrophotometer...
1795
rharris@...
Oct 5, 2008 9:48 pm
Dear Kristina I don't know if anyone else has replied before now, but the problem is that you do not have the latest version of nmrPipe, the version you have ...
1796
Ryan McKay
ryan_nanuc
Oct 6, 2008 5:45 pm
No problem on my machine. Which X11 are you using? I'm running XQuartz 2.3.1 xorg-server-1.4.2- apple 17 R On 4-Oct-08, at 12:22 PM, Douglas Kojetin wrote: Hi...
1797
Ryan McKay
ryan_nanuc
Oct 6, 2008 5:45 pm
Hi there, What is the seqfil you're using? e.g. ghcch_tocsy or ghcch_tocsyA? R On 2-Oct-08, at 3:57 PM, michal.respondek wrote: I have tried that one, it is...
1798
Douglas Kojetin
envirodug
Oct 6, 2008 6:39 pm
From X11.app > X11 > About X11 Xquartz 2.1.5 - (xorg-server 1.3.0-apple22) (2.1.5) How did you obtain the newer version? Thanks, Doug...
1799
Ben Eisenbraun
bpeisenbraun
Oct 6, 2008 7:05 pm
... http://xquartz.macosforge.org/trac/wiki -b -- Ben Eisenbraun Structural Biology Grid Harvard Medical School http://sbgrid.org...
1800
michal.respondek
michal.respo...
Oct 7, 2008 10:43 am
Hi, the seqfil we used is ghcch_tocsy. Though It would be interesting to see the processing scripts for both of the seqfil....
1801
Ryan McKay
ryan_nanuc
Oct 14, 2008 5:51 pm
Hi there, Take the 3D script from the NANUC NMRPipe script library and try this for the fid.com It was contributed by Tara Sprules (Eastern Canadian NMR...
1802
ysosuke
Oct 15, 2008 1:23 pm
Dear all, I'd like to know what is wrong with my fid.com script to process 4D 15N-15N NOESY spectrum. I got a strange spectrum after executing the fid.com...
1803
virus4126
Oct 16, 2008 11:24 am
Dear all: I recently collected a CCH-Tocsy and a (4D) 13C,15N-edited NOESY .For the CCH-Tocsy, I got the test%03d.fid(test011.fid-test060.fid) with the...
1804
ysosuke
Oct 16, 2008 9:16 pm
Dear Yu, Could you send or show me your fid.com script for 4D 13C,15N-edited NOESY, if you don't mind? I just posted an issue on the fid.com script for 4D...
1805
Frank Delaglio
bigfdelaglio
Oct 17, 2008 3:40 am
The manual page for LP has some notes about how to fix bad data. In the case of bad planes in a 3D, one approach is to transform the first two dimensions, then...
1806
Sébastien Morin
sebastien.morin.1@...
Oct 17, 2008 1:43 pm
Hi, Some tips can also be found in the last two sections (6.8 and 6.9) of the following page : ...
1807
dr_domincanchick
dr_domincanc...
Oct 17, 2008 7:07 pm
Hi everyone, Installation of NMRPipe should be simple, but I am having some issues. I downloaded all the necessary files (NMRPipe.tar), I am running a c- shell...
1808
nkjvcjs
Oct 30, 2008 10:56 pm
We took a series of 2D spectra for a t1 relaxation on a Bruker Avance 800. Each one has its own directory. I am trying to write a script that will open,...
1809
Frank Delaglio
bigfdelaglio
Nov 1, 2008 1:40 am
Your version of the script seems to mix two cases, one where each tau value is in a seperate experiment, and the other where all tau values are interleaved in...
1810
kristie_1213
Nov 3, 2008 9:18 pm
Hello all, I recently installed nmrPipe on a Mac running OS 10.5.5 and X11 (Xquartz 2.1.5 - (xorg-server 1.3.0-apple22) (2.1.5)), and everything seemed to go...
1811
Frank Delaglio
bigfdelaglio
Nov 4, 2008 1:30 am
All Hail Kristie, HUZZAH!!! Thanks for sharing, this is very handy. f...
1812
eisoab
Nov 10, 2008 2:58 pm
I'm trying to use nmrDraw on a remote machine, while displaying locally. Both machines run Scientific Linux. Opened spectra are displayed (only after 'draw')...
1813
Frank Delaglio
bigfdelaglio
Nov 10, 2008 8:43 pm
Check that the remote machine is set to 24-bit TrueColor; 16 or 32 bit might be a problem. Also, try a different window manager, at least as a test; sometimes...
1814
Ben Eisenbraun
bpeisenbraun
Nov 10, 2008 8:55 pm
... I've seen this when there is an invalid RgbPath specified in the xorg.conf. Xorg generally has safe defaults for settings like that, so I comment it out on...
1815
swati_sbt
Nov 13, 2008 8:15 pm
Hi all, I am a new user of nmrDraw. I am trying to process my .fid using the basic 2D macro. Everything goes fine but I am seeing doublets (two peaks stacked...
Thanks! I have comments about the suggested scheme, though: 0. This scheme sends the FID data directly to a processing pipeline. This use is correct. However:...
