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nmrpipe · Information on use and features of NMRPipe, the system for multi-dimensional NMR spectral processing and analysis.

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  • Members: 1300
  • Category: Chemistry
  • Founded: Nov 3, 1998
  • Language: English
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We took a series of 2D spectra for a t1 relaxation on a Bruker Avance 800. Each one has its own directory. I am trying to write a script that will open,...
2 Nov 1, 2008
1:40 am

Frank Delaglio
bigfdelaglio
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Hi everyone, Installation of NMRPipe should be simple, but I am having some issues. I downloaded all the necessary files (NMRPipe.tar), I am running a c- shell...
1 Oct 17, 2008
7:07 pm

dr_domincanchick
dr_domincanc...
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Dear all, I'd like to know what is wrong with my fid.com script to process 4D 15N-15N NOESY spectrum. I got a strange spectrum after executing the fid.com...
1 Oct 15, 2008
1:23 pm

ysosuke
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Dear All, I have a 3D double sensitivity enhanced hcch-tocsy acquired on Varian. So far I have been processing the spectra using: var2pipe -in ./fid -noaswap...
6 Oct 14, 2008
5:51 pm

Ryan McKay
ryan_nanuc
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Hi All, I get a segmentation fault when trying to use nmrWish under Mac OS 10.5.5 (using a freshly downloaded copy of NMRPipe): $ nmrWish Segmentation fault Is...
4 Oct 6, 2008
7:05 pm

Ben Eisenbraun
bpeisenbraun
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As I am not quite sure if my previous message has been sent I send it again. Sorry if it comes twice. ... Dear All, For an HSQC (Bruker) the bruker GUI...
3 Oct 5, 2008
9:48 pm

rharris@...
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Hi, I would like to know whether anyone knows about a linux/mac programme/script which can convert .dat format file obtained from an omega spectrophotometer...
1 Oct 5, 2008
6:26 pm

susmita_b
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Hey everyone, I apologize if this gets posted twice, but I tried to send an email earlier and it didn't seem to take. I just recently had to reinstall Windows...
3 Sep 17, 2008
8:36 pm

Tara Sprules
tarasprules
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I just upgraded from Ubuntu Feisty to Hardy, and now when I try to start nmrDraw I get: nmrdraw: ../../src/xcb_io.c:285: _XAllocID: Assertion `!(dpy->flags & ...
2 Sep 17, 2008
7:31 pm

Frank Delaglio
bigfdelaglio
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Hi NMRPipe users. I have come across a problem, when I transform CBCACONH or HNCACB spectra using command "Bruker" and read the parameters, the data points of...
2 Sep 9, 2008
12:57 pm

Nicholas Fitzkee
nfitzkee@...
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I will be out of the office starting 09/08/2008 and will not return until 09/10/2008. I will respond to your message when I return....
1 Sep 9, 2008
8:12 am

ssahoo@...
sangramasahoo
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Is there any macro to fit the array of the 2D spectra using different peak list (list.tab) for the different 2D relaxation spectrum ? rather then using one...
1 Aug 5, 2008
2:24 am

shapirabz
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Hello all, We are attempting to get the SoFast NMR experiments up and running on our Bruker 600 Avance DMX spectrometer. We are running the most recent...
8 Aug 4, 2008
12:02 am

Paul Gooley
prg@...
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Dear All, I am having problems running nmrDraw on Mandriva linux (version 2008.1). When installing, the graphics check seems to find the XView fonts but then...
4 Jul 31, 2008
10:23 am

spoget@...
spoget
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I am looking for advice on how to process my eCosy experiment. It looks like a processing error with ghost images but then when I look at the FID it decays...
1 Jul 28, 2008
10:06 pm

jimbur1120
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Hello All, I recently collected a COSEY spectrum with QF acquisition mode in the indirect dimension on a Bruker spectrometer. I tried to convert and process it...
1 Jul 11, 2008
7:35 pm

Mumdooh A. Ahmed
mumdonar
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There are some people saying that at the current demand for helium, the Federal Helium Reserve will run out in less than 8-10 years. There are methods to...
1 Jul 10, 2008
4:11 pm

Nicole Freedman
nkjvcjs
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Ahoy, Dear Colleagues, There are many recent questions behind the scenes about installing NMRPipe on 64-bit Linux environments. So, if any of you have tried...
7 Jul 8, 2008
8:59 pm

Matthew Craddock
craddocm
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Hello, I was trying to convert files from bruker to pipe and then to sparky. The spectra are H-H-N15 (3D) but the final sparky file recognizes all three axis...
3 Jul 1, 2008
12:05 pm

sette@...
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Dear All, The 2008 NMR BootCamp early registration deadline is today. However as it's the Canada Day long weekend we won't be checking our Fax machine in till...
1 Jun 28, 2008
2:42 am

ryan_nanuc
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Hi all, I have got a trouble when I installed NMRPipe on Ubuntu 8.04. When I tested the installation 'which nmrPipe' and 'man nmrPipe' worked fine but 'nmrPipe...
2 Jun 19, 2008
12:40 pm

spoget
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Dear user~ It's long time since i have written something in here yesterday I have upgraded fedora 9 . in fedora 9 installation of nmrpipe seems to go on...
3 May 20, 2008
1:03 pm

Frank Delaglio
bigfdelaglio
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Hi, I am interested in using the NMRPipe-based titration analysis programs. It appears that I am missing some of they key tcl scripts though (pcaView.tcl,...
5 May 14, 2008
2:37 pm

Geoff Kelly
gkelly@...
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Dear nmrPipers, I am wondering about nlinLS performance dealing with very weak peaks. Say, the spectrum is a mixed lot - some strong, slowly relaxing peaks, ...
3 May 9, 2008
5:11 pm

Jean-Philippe Demers,...
jpdemethyl
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Hi there, I used mfr.tcl as part of CS-Rosetta and obtained the expected fragment files, now I wonder if there is some documentation that helps me understand...
2 May 9, 2008
1:54 am

Frank Delaglio
bigfdelaglio
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Hi, I am currently trying to use autoFit.tcl with lots of spectra (i.e. 76). I used it before with success, but I get the error : ...
5 May 2, 2008
8:27 pm

Sébastien Morin
sebastien.morin.1@...
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Hello all, I am a brand new user of both nmrpipe and nmrview, and I'm trying to become familiar with the combination of the two, therefore it might be that my...
4 Apr 25, 2008
9:06 pm

Serena Leone
sleone@...
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Dear Pipers, I invite you to take a look at the (already quite old - 6 months, but still kicking) NMR website: nmrwiki.org. Please see if you like the idea. ...
1 Apr 22, 2008
10:46 am

Evgeny
fadeev
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Dear All, Does any one know any other sources (rather than PDB) that has the structural information (structures or models)of protein/peptide? (I apologize if...
1 Apr 15, 2008
1:19 pm

leili_college
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Hi, I have acquired Noesy - C-hsqc spectrum on 900MHz Bruker spectrometer. The spectrum was acquired with the following pulse sequence: noesyhsqcetgp3d from...
1 Apr 8, 2008
1:32 pm

michal.respondek
michal.respo...
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