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· Information on use and features of NMRPipe, the system for multi-dimensional NMR spectral processing and analysis.
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Problems with script for making Pseudo 3D
We took a series of 2D spectra for a t1 relaxation on a Bruker Avance 800. Each one has its own directory. I am trying to write a script that will open,...
Nov 1, 2008
Installation of NMRPipe...HELP!
Hi everyone, Installation of NMRPipe should be simple, but I am having some issues. I downloaded all the necessary files (NMRPipe.tar)
, I am running a c- shell...
Oct 17, 2008
Processing of 4D 15N-15N NOESY data
Dear all, I'd like to know what is wrong with my fid.com script to process 4D 15N-15N NOESY spectrum. I got a strange spectrum after executing the fid.com...
Oct 15, 2008
Dear All, I have a 3D double sensitivity enhanced hcch-tocsy acquired on Varian. So far I have been processing the spectra using: var2pipe -in ./fid -noaswap...
Oct 14, 2008
Mac OS 10.5.5 nmrWish segmentation fault
Hi All, I get a segmentation fault when trying to use nmrWish under Mac OS 10.5.5 (using a freshly downloaded copy of NMRPipe): $ nmrWish Segmentation fault Is...
Oct 6, 2008
DECIM and DSPFVS
As I am not quite sure if my previous message has been sent I send it again. Sorry if it comes twice. ... Dear All, For an HSQC (Bruker) the bruker GUI...
Oct 5, 2008
programme/script to convert .dat file into pipe format in linux/mac
Hi, I would like to know whether anyone knows about a linux/mac programme/script which can convert .dat format file obtained from an omega spectrophotometer...
Oct 5, 2008
nmrDraw problems in SFU 3.5
Hey everyone, I apologize if this gets posted twice, but I tried to send an email earlier and it didn't seem to take. I just recently had to reinstall Windows...
Sep 17, 2008
nmrDraw in Ubuntu Hardy
I just upgraded from Ubuntu Feisty to Hardy, and now when I try to start nmrDraw I get: nmrdraw: ../../src/xcb_
io.c:285: _XAllocID: Assertion `!(dpy->flags & ...
Sep 17, 2008
CBCACONH conversion problem to NMRpipe formate
Hi NMRPipe users. I have come across a problem, when I transform CBCACONH or HNCACB spectra using command "Bruker" and read the parameters, the data points of...
Sep 9, 2008
Sangrama K Sahoo is out of the office.
I will be out of the office starting 09/08/2008 and will not return until 09/10/2008. I will respond to your message when I return....
Sep 9, 2008
Fitting pseudo 3D spectra (relaxation)
Is there any macro to fit the array of the 2D spectra using different peak list (list.tab) for the different 2D relaxation spectrum ? rather then using one...
Aug 5, 2008
Hello all, We are attempting to get the SoFast NMR experiments up and running on our Bruker 600 Avance DMX spectrometer. We are running the most recent...
Aug 4, 2008
nmrDraw problems in Mandriva linux
Dear All, I am having problems running nmrDraw on Mandriva linux (version 2008.1). When installing, the graphics check seems to find the XView fonts but then...
Jul 31, 2008
I am looking for advice on how to process my eCosy experiment. It looks like a processing error with ghost images but then when I look at the FID it decays...
Jul 28, 2008
Hello All, I recently collected a COSEY spectrum with QF acquisition mode in the indirect dimension on a Bruker spectrometer. I tried to convert and process it...
Jul 11, 2008
Mumdooh A. Ahmed
Re: 1.6 Times Higher Liquid Helium Price ?
There are some people saying that at the current demand for helium, the Federal Helium Reserve will run out in less than 8-10 years. There are methods to...
Jul 10, 2008
NMRPipe on 64-bit Linux
Ahoy, Dear Colleagues, There are many recent questions behind the scenes about installing NMRPipe on 64-bit Linux environments. So, if any of you have tried...
Jul 8, 2008
Hello, I was trying to convert files from bruker to pipe and then to sparky. The spectra are H-H-N15 (3D) but the final sparky file recognizes all three axis...
Jul 1, 2008
2008 NMR BootCamp - early registration deadline today
Dear All, The 2008 NMR BootCamp early registration deadline is today. However as it's the Canada Day long weekend we won't be checking our Fax machine in till...
Jun 28, 2008
Installing NMRPipe on Ubuntu 8.04
Hi all, I have got a trouble when I installed NMRPipe on Ubuntu 8.04. When I tested the installation 'which nmrPipe' and 'man nmrPipe' worked fine but 'nmrPipe...
Jun 19, 2008
problem with fedora 9 for nmrDraw
Dear user~ It's long time since i have written something in here yesterday I have upgraded fedora 9 . in fedora 9 installation of nmrpipe seems to go on...
May 20, 2008
Titration tcl files
Hi, I am interested in using the NMRPipe-based titration analysis programs. It appears that I am missing some of they key tcl scripts though (pcaView.tcl,...
May 14, 2008
nlinLS weak peaks
Dear nmrPipers, I am wondering about nlinLS performance dealing with very weak peaks. Say, the spectrum is a mixed lot - some strong, slowly relaxing peaks, ...
May 9, 2008
mfr.tcl output file
Hi there, I used mfr.tcl as part of CS-Rosetta and obtained the expected fragment files, now I wonder if there is some documentation that helps me understand...
May 9, 2008
autoFit.tcl with lots of spectra
Hi, I am currently trying to use autoFit.tcl with lots of spectra (i.e. 76). I used it before with success, but I get the error : ...
May 2, 2008
hsqc and nmrview
Hello all, I am a brand new user of both nmrpipe and nmrview, and I'm trying to become familiar with the combination of the two, therefore it might be that my...
Apr 25, 2008
Dear Pipers, I invite you to take a look at the (already quite old - 6 months, but still kicking) NMR website: nmrwiki.org. Please see if you like the idea. ...
Apr 22, 2008
protein/peptide structure data source other than PDB?
Dear All, Does any one know any other sources (rather than PDB) that has the structural information (structures or models)of protein/peptide? (I apologize if...
Apr 15, 2008
Hi, I have acquired Noesy - C-hsqc spectrum on 900MHz Bruker spectrometer. The spectrum was acquired with the following pulse sequence: noesyhsqcetgp3d from...
Apr 8, 2008
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