3D Axis order can be re-arranged during processing by having different dimensions as input and output in the head and tail of the pipleine. Most usually, this...
202
ybzhang@...
Aug 27, 2001 9:53 pm
Hi, Everyone, I remember that there is a tcl utility program, which is standard in NMRPIPE package, can extract useful columns from peak list picked ...
203
Siddhartha Sarma
sidd@...
Aug 28, 2001 4:00 am
stripPlot.tcl....
204
Karin Hohenthanner
karinh2001at@...
Aug 31, 2001 7:39 am
Dear users, I am looking for a macro for nmrPipe to convert a 3d data set acquired on a varian spectrometer with conversion mode being Rance-Kay in both...
205
solwind@...
Aug 31, 2001 8:17 am
Dear, As I know, using two special MODE is impossible. So one domain is converted with '-yMODE Echo-AntiEcho', and the other domain with "| nmrPipe -MAC...
206
Siddhartha P. Sarma
sidd@...
Aug 31, 2001 8:45 am
You could try setting Rance-Kay in both dimensions e.g. var2pipe -in fid \ -xN 1024 -yN 128 -zN 64 \ -xT...
207
james_nmr@...
Oct 9, 2001 1:02 am
Hi all We have acquired two 3D HNCO interleaved on a Varian 600 with the following phase arrays: array = Kappa,phase2,phase 0,2 1,2 1,2 in which phase2...
208
Frank Delaglio
delaglio@...
Oct 9, 2001 3:36 pm
Many Greetings ... As to the example from James: 1. The conversion script looks like it was made by hand ... Varian users should experiment with the delights...
209
Michael Massiah
massiah@...
Oct 9, 2001 6:20 pm
Hi James, I presumed this is a IPAP dataset with Lewis Kay's grad enhancement. Lewis has macros that will extract the two data set which can then be processed...
210
Fred Muskett
fmusket@...
Oct 10, 2001 10:51 am
Hi All, Similar problem. Collected an interleaved 3D ipap-hnco with array set to 'ipap,phase2,phase' (no Rance-Kay sensitivity enhancement). Data conversion as...
211
Alex Breeze
breeze@...
Oct 10, 2001 12:33 pm
James, This is my interpretation of the problem: The *implicit* array in your acquired Varian 3D data set is 'd3,d2,kappa,phase2,phase'. According to Varian...
212
jfa_jansen@...
Oct 10, 2001 6:46 pm
Hi, I have recorded some 1D's at a Varian 500. The samples contain TSP, so I wanted to set the TSP peak at 0 ppm. My question is: Can this be done? If this has...
213
Keith Inman
kinman@...
Nov 2, 2001 2:26 pm
Hi group. Can anyone tell me how to generate a data set with a constant value, such as a string of 1's? I want to be able to apply a window function and see...
214
Kevin Gardner
nmrkev
Nov 2, 2001 2:38 pm
... Try: nmrPipe -fn SET -r 1 Handy from within nmrDraw's Proc/NMRPipe command window, to try fxns out on vectors loaded from a matrix. Sincerely, Kevin -- ...
215
Kiattawee Choowongkomon
kiattawee
Dec 2, 2001 2:26 pm
Does anyone has script to process HNHA I'm new and not sucessful to try it....
216
Kiattawee Choowongkomon
kiattawee
Dec 2, 2001 2:27 pm
Does anyone has script to process HNHA I'm new and not sucessful to try it....
217
Frank Delaglio
delaglio@...
Dec 2, 2001 7:53 pm
These are some typical scripts for amide-detected 3D data. Phase corrections will of course vary. In the 3D processing, if the Y-axis of the FID is 15N, the...
218
Rajesh Dabur
rajeshdabur
Dec 14, 2001 5:22 pm
Will anyone please tell me how to download the NMRPipe programme. I have connected the site but could not downloaded the programme. Will you please tell me the...
219
chikaichow
Feb 15, 2002 10:30 pm
Hi, We are processing our varian 3d data and are stuck with the last part of the script. Everything works well without the last "inverse, LP, then re-process"...
220
Frank Delaglio
delaglio@...
Feb 15, 2002 11:21 pm
oh, these kids of today! I sent these comments to Clement directly earlier, perhaps this broadcast version will be more helpful ... 1. Clement didn't set the...
221
Geoff Kelly
gkelly@...
Feb 18, 2002 10:05 am
Shouldn't the first line of the last part be: xyz2pipe -in ft3/hnca_1_77%03d.ft3 -y -verb \ ? Cheers Geoff Biomediacal NMR Centre National Institute for...
222
R. Andrew Byrd
rabyrd@...
Feb 19, 2002 2:57 pm
Greetings, Just some info to update those with a craving for speed. We have been moving to LINUX-based processors, and the following indicates why: System:...
223
Hsin Wang
wang@...
Feb 19, 2002 4:40 pm
Clement, I don't know if you got your problem solved. Please forgive me if it had already been dealt with. The problem, it seems to me, is that you changed ...
224
Matt Cheever
matt.cheever@...
Feb 21, 2002 5:21 pm
Hi, When I run nmrDraw, I get the following message in the xterm I used to start the program. XView warning: Notifier error: Unknown client XView warning:...
225
Rensheng Luo
rsluo
Mar 6, 2002 8:00 pm
Dear users, I am looking for a macro for nmrPipe to convert a 4d HNCOCA data set acquired on a varian spectrometer . Thanks ...
226
Frank Delaglio
delaglio@...
Mar 15, 2002 4:24 pm
Dear Colleagues, I was notified about the following nice position, thought it might be of interest to our group ... Many Cheerful Regards, Frank PS: if any of...
227
Michael Massiah
massiah@...
Mar 22, 2002 5:35 pm
Hello NMR gurus, Can someone send me an example for the restraint files for dipolar couplings to be input in CNS? thanks MIke massiah@......
228
cao chunyang
caoccyzw@...
Mar 22, 2002 11:27 pm
Dear NMRPipe users: Recently I try to install NMRPipe in my redhat linux 7.2. I do as what the file INSTALL says. But while I install the program, the...
229
ma jin miao
jbma@...
Mar 23, 2002 1:44 am
Laocao, What is your default user/terminal shell? csh or bach? NMRPipe must need csh. I think the installation of NMRPipe is no problem in Redhat. Recently I...
230
Frank Delaglio
delaglio@...
Mar 25, 2002 2:19 pm
Happy New Year! Cheerful Regards, The Moderator...
