greetings! i've just run my first 4D - a 13C,13C-noesy - and think i have the varian conversion and the processing figured out. i seem to be a bit puzzled with...
309
Norma Pawley
npawley@...
Oct 31, 2002 6:13 pm
Dear All: Thanks to everyone for suggestions on how to fix the mirror image problem in the hnco. I learned about many possible pitfalls in data processing. ...
308
Norma Pawley
npawley@...
Oct 29, 2002 11:28 pm
Dear Ryan, Thank you for the suggestions. The fid.com file you sent contained a necessary correction for the carbon dimension (States-TPPI vs. Complex)....
307
Frank Delaglio
delaglio@...
Oct 29, 2002 2:56 pm
Many greetings ... nmrDraw accepts the "-scale" arguments "small" "medium" "large" and "extra_large" ... these can be invoked from the command line, for...
306
darked89
Oct 29, 2002 12:20 am
Dear All, we run nmrpipe on Debian Linux 3.0 with XFree 4.1.0. I have a low resolution LCD screen (1024x768) When we start either nmrdraw or varian the size of...
305
not_easy30605
Oct 28, 2002 2:15 am
Hi, dear piper, I got some 1D projections along the indirect dimension. After Hilbert transformation, zero filling and fourier transfermation, I got some some...
304
not_easy30605
Oct 28, 2002 2:04 am
thanks...
303
Hsin Wang
wang@...
Oct 25, 2002 10:40 pm
No one seems to have picked up the question of tcl and tk compatibility of nmrPipe. I have a simple script (which I call "piperc") work-around for systems...
302
Antonio Hernandez Dar...
adaranas
Oct 25, 2002 10:08 pm
Dear nmrPipe users, I'm trying to use the assD.tcl script to reassign some peaks in a "perturbed" HSQC according to existing "unperturbed" assignments (free ...
301
Milton H. Werner, Ph.D.
mwerner@...
Oct 25, 2002 7:45 pm
Hi, We're trying to get nmrShell to spread jobs across a linux cluster of 10 nodes. rsh works fine on all an an explicit path is given for read/write....
300
Frank Delaglio
delaglio@...
Oct 25, 2002 5:55 pm
Many greetings ... It seems that some recent "canned" Bruker pulse sequences have changed the signs of channels in Echo-AntiEcho acquisitions. In at least some...
299
Ryan McKay
ryan_nanuc
Oct 25, 2002 4:17 pm
Dear Norma, Bruker data is acquired (if I have the right pulse sequence you mentioned) 1H,15N,13C for that experiment. Bruker data also seems to require...
298
b0son
Oct 25, 2002 1:55 am
... machines ... Are you using Varian or Bruker? I try to use the 'varian' GUI conversion utility for converting spectra to pipe format, but it doesnt like my...
297
b0son
Oct 25, 2002 1:51 am
Problems solved!!! It was a problem with invisible characters after all... characters which didn't appear in vi, but did show up in xedit (i had been doing my...
296
Patrick Loria
monterosso96
Oct 25, 2002 12:15 am
Try States or States-TPPI in the carbon dimension (depending on how it was set up) ... -- J. Patrick Loria, Assistant Professor Department of Chemistry Yale...
295
Norma Pawley
npawley@...
Oct 25, 2002 12:02 am
Dear Colleague, I am a new nmrPipe user, attempting to process an HNCO experiment collected on a Bruker Avance spectrometer. Since we used the echo/anti-echo...
294
solwind1024
Oct 24, 2002 6:13 pm
Hi, In my exprience, problem of processing Varian data is caused by bad data or wrong experiment, not improper script. please check that your data could be...
293
Pedro DA SILVA
editra2002
Oct 24, 2002 2:30 pm
Hi, I have some problems in phasing a ghnha experiment from varian I don't know where the problem comes from. does anyone have example of script to process a...
292
Pedro DA SILVA
editra2002
Oct 23, 2002 4:41 pm
Hi, I have some problems in phasing a ghnha experiment from varian I don't know where the problem comes from. does anyone have example of script to process a...
291
SCAHILL, TERRENCE A [...
terrence.a.scahill@...
Oct 22, 2002 6:42 pm
Dear Frank, Please remove my name from your list. Thanks, Terry Terrence A Scahill, PhD Pharmacia Corporation MS 9181-298-340 Ph 833-7807...
290
Frank Delaglio
delaglio@...
Oct 22, 2002 5:50 pm
Oh yeah, one more thing ... user's default shell (listed in "passwd" file) should be the C-shell (or T C-shell), not bash or bourne ......
289
Keith G Inman
kinman@...
Oct 22, 2002 4:58 pm
Especially consider white spaces after the backslashes at the ends of lines. This has caught me more than once with "cut-and-pasted" scripts. Also, if the...
288
Dr. A. Golovanov
A.Golovanov@...
Oct 22, 2002 4:43 pm
Difficult to tell without actually seeing the script, but: May be there are some "invisible" characters inserted "accidentally" in the command lines (or at...
287
Kevin Gardner
nmrkev
Oct 22, 2002 2:55 pm
Hi all: No problem here w/nmrPipe or related programs on RH8.0 machines freshly upgraded from RH7.3. Several 2D and 3D scripts that had worked on the same...
286
b0son
Oct 22, 2002 1:12 pm
... yes, it is... though i have the same problems whether I run the script in bash or csh. interestingly, if i run the commands one-by-one, they work.... ...
285
Frank Delaglio
delaglio@...
Oct 22, 2002 12:41 pm
Hi ... is your script explicitly identified as a C-shell script via the first line "#!/bin/csh" ? NMRPipe pipeline scripts will generally not work if executed...
284
ms
sette@...
Oct 22, 2002 7:37 am
... Yes, very fine. Marco...
283
b0son
Oct 22, 2002 7:26 am
anyone tried to run NMRPipe under RH8? i'm having all manner of strife.... trying to run a script results in various 'broken pipe', 'command not found', 'no...
282
Lorraine Cavanaugh
mayaguezcoqui
Oct 11, 2002 12:08 am
Dear Sangwon, I think the most painless way to install XDarwin and XFree86 is to use the links by the XonX group at Sourceforge: ...
281
Sangwon Lee
sangwonlee_71
Oct 10, 2002 10:44 pm
Dear NMRPipe users, I am trying to install NMRPipe on Mac OS X, but it seems that I also need to install X11 graphics server and libraries, according to...
