Hello I am sure this is a trivial question, but I am not used to nmrPipe yet, and cannot seem to find this in the man pages. How do I get 1D projections from a...
Hi Jakob, You find some TCL scripts for projections on the executable path in the "com" directory: proj2D.tcl and proj3D.tcl Cheerful Regards, Frank proj2D.tcl...
Frank Delaglio
delaglio@...
Apr 3, 2003 3:03 pm
378
Dear Frank, Sometime back I had asked for some help in making stack pots of 1D spectra processed using NMRPipe. Do you have any suggestions? Siddhartha ... --...
Siddhartha Sarma
sidd@...
Apr 4, 2003 2:23 am
379
Hello everybody, I have some problems in processing noesyhsqc tocsyHsqc from Bruker DRX 800MHZ. Does anyone have nmrpipe script for processing these data. ...
Hi everyone, I use new Sun machine (Blade 2000, two processors) running Solaris 9 (64- bit system). I have installed precompiled version of Nmrpipe (sol). ...
Vaclav Veverka
vv12@...
Apr 10, 2003 3:41 pm
381
Hi, I am trying to use a macro to add and subtract two 2D slices in a pseudo 3D (3,2)GFT spectrum. The statement I try is (in a pipeline): nmrPipe -fn MAC...
Hi,
I made a mistake in my macro for the previous message. I should be
added and subtracting 2D slices (z), not 1D slices (y). But the question on= how to...
Greetings all ... A little more about the macro language can be found in the "MAC" man page. As Rene suggestion, NMRPipe macros which read and write their own...
Frank Delaglio
delaglio@...
Apr 14, 2003 5:38 pm
384
Hi,
I just ran into a error message when the bruker conversion program read the= parameters. The error occurred while parsing the hncogp3d.3 pulseprogram, w= ...
... most recent version of "bruker" seems to be able to handle the problematic construct that Rene was kind enough to illustrate ... cheerful regards, big fd ...
Frank Delaglio
delaglio@...
Apr 16, 2003 5:06 pm
386
In response to the recent comments about running nmrPipe on a Sun Blade 2000, I thought I would add our experience. When carrying out the identical simple 2D...
david
livex001@...
Apr 28, 2003 2:53 pm
387
Hello! Can anybody please send me the scripts for processing the N15-HSQC-IPAP in both ways aquired on Varian 600 Unity plus and Bruker Avance 500. Thanking in...
Thanks David ... Here's a comment though: a short 2D processing scheme may not be a good choice for a processing speed benchmark. A 3D case that takes a more...
Frank Delaglio
delaglio@...
Apr 28, 2003 7:19 pm
389
IPAP conversion and processing schemes can differ substantially based on: 1. Whether the data are gradient enhanced. 2. Whether the IP/AP loop is the innermost...
Frank Delaglio
delaglio@...
Apr 28, 2003 7:37 pm
390
Dear All, I have an hcch-tocsy experiment (hcchtocsy.fa) that can be processed on Bruker using States in 13C and States in 1H indirect-detect dimension. This...
Norma Pawley
npawley@...
May 13, 2003 9:57 pm
391
Dear NMRpipe’rs, NANUC is happy to announce our 2003 training course. Frank Delaglio will present his NMRPipe and other software packages at NANUC ...
Howdy to all... Has anyone been able to get the drx2pipe script working under Linux (specifically, RedHat 8.0) with Bruker Avance data acquired using xwinnmr...
Hi Ronald, I have not tried it under Linux, so I have no idea if it should work. However the error you get relates to the instrument name. You either need to...
Duncan M Smith
duncan@...
May 15, 2003 6:30 pm
394
Hi, All: I was trying to install the current version of NMRPipe into two SGI O2 workstations (R5000 and R10000) running OS IRIX6.5. The graphics test failed...
How does one replace the first data points in an fid using LP? Tara Sprules Post-Doctoral Fellow Department of Chemistry University of Alberta Edmonton, AB ...
from "man LP" ... cheerful regards, big FD PARAMETERS FOR PREDICTION BEFORE When LP is used with the "-before" argument, it will work by replacing points...
Frank Delaglio
delaglio@...
May 22, 2003 4:57 pm
398
Hello all, Does anyone have advice on using nmrDraw/nmrPipe for estimating signal to noise. At the moment for 2D spectra I'm simply using the "estimate noise"...
Hi: I am trying to do LP in the two indirect dimensions of a 3D NOESY-HSQC. If I do one after the other the result is not completetely satisfactory since,...
Francisco Blanco
fblanco@...
May 24, 2003 8:14 pm
400
Hi Francisco I can see a possible couple of faults. You are not using first point scaling correctly. If you have a first order (p1) phase correction of 0.0 ...
Paul Gooley
prg@...
May 25, 2003 11:14 pm
401
Hi All, I have a basic question. I would like to overlay 1D vector from two different 2D spectra see the differnce in signal height. Can this be don? Or is it...
Hi Mike and Everyone Else ... As to estimating noise levels in NMRDraw: In addition to the automated noise estimate from the "Draw/Estimate Nosie" command, you...
Frank Delaglio
delaglio@...
May 27, 2003 3:47 pm
403
Hi All ... HN/N NOE experiments are often set up with a one-dwell delay (P0=-180 P1=360) in the indirect 1H dimension. This means that the first point of the...
Frank Delaglio
delaglio@...
May 27, 2003 4:14 pm
404
Dear Frank, Is there an archive site for NMRPIPE mailing list ? thanks, Padmanava ... __________________________________ Do you Yahoo!? Yahoo! Calendar - Free...
Hi All- I am having a problem peak picking a 3D dataset. I've checked the message board, and the only similar problem I saw was way back near the beginnings of...
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