Hello, I am processing a couple of bruker datasets(HCCH-TOCSY, C13-NOESY and N15-NOESY, from AVANCE 800MHz) using nmrPipe. This is the first time I work with...
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Patti Liwang
pliwang@xxxxx.xxxx.xxxx
Jul 28, 1999 9:54 pm
Hello Dr. Zhang, For bruk2pipe and nmrPipe documentation, go to http://www.resdesigns.com/ There are lots of examples there. Your letter implies you have...
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Marta Maieron
MMaieron@xxxxx.xxxx.x...
Aug 2, 1999 2:13 pm
Hallo, I've just started to use the NMRpipe program to process Bruker data. I would like to know if it is possible to phase 2D spectra in both dimentions. ...
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mmaieron@xxxxx.xxxx.x...
Aug 2, 1999 2:43 pm
Hallo, I've just started to use the NMRpipe program to process Bruker data. I would like to know if it is possible to phase 2D spectra in both dimentions. ...
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Istvan Pelczer
ipelczer@xxxxxxx.xxxx...
Aug 2, 1999 2:57 pm
Dear Marta, There are various ways to do this, one is to interrupt processing after t2-->F2 and transpose, then find phase parameters interactively. An ...
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Nino Barbato
barbato@xxxx.xxx
Aug 5, 1999 12:02 pm
Hi there everybody I have a problem trying to transform a bruker DMX avance acquired gradient echo anti echo experiment. I usually split the conversion from...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Aug 5, 1999 1:17 pm
Dear Colleagues, Many cheerful regards to all. As to our friend Nino's problems converting Echo-AntiEcho 3D data: the original (problematic) conversion scheme...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Aug 5, 1999 2:33 pm
... Interactive Phasing NMRDraw will automatically reconstruct imaginary data as needed, so it is always possible to interactively rephase any 1D spectral ...
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Keith G Inman
kinman@xxxxxxxxx.xxxx
Aug 5, 1999 3:38 pm
Frank: I have not been able to change the pivot point by using the mouse right button in border. That has the effect of raising or lowering the display of the...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Aug 5, 1999 4:15 pm
Dear Colleagues, As Keith noted, I am an idiot. When I said use the "rightmost mouse button" to adjust the pivot point, I actually meant that other rightmost...
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Yongbo Zhang
yxz8@xx.xxxx.xxxx
Aug 24, 1999 4:09 pm
Hello, I have a problem to convert Bruker Echo-AntiEcho data to nmrpipe format. That is a N15-NOESY dataset. I used following different options and get same...
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Duncan M Smith
duncan@xxxxx.xxxx
Aug 24, 1999 5:42 pm
Hi Yongbo, Here is a conversion file for a 15N NOESY: #! /bin/csh -f # convert.com # File created by drx2pipe on Tue Oct 22 17:22:32 PDT 1996 # Data...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Jan 10, 2000 4:53 pm
Dear Colleagues, Our NMRPipe mailing list hosts are about to declare us "Dead Wood", since the mailing list has been so quiet. We can save the list simply by...
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Istvan Pelczer
ipelczer@xxxxxxx.xxxx...
Jan 10, 2000 5:11 pm
Hi Frankie, Happy New Year! Good timing for the invitation; I had one question. Would the WindowsNT version NMRPipe running under Windows98? Thanks, cheers, ...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Jan 10, 2000 5:21 pm
Dear Istvan and Colleagues, The Windows-NT version of NMRPipe doesn't run under Windows98, as this OS doesn't provide asynchronous pipelines. It will run ...
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Sharon J Archer
Sharon.J.Archer@xxxxx...
Jan 10, 2000 5:26 pm
A few testimonials on nmrPipe: "Perhaps the list is quiet, because the software is so good. Or perhaps we're just too busy swearing at the magnet to process...
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M.J. Howard
mjh46@xxx.xxx.xx.xxx
Jan 11, 2000 11:51 am
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Geoff Kelly
gkelly@xxxx.xxx.xx.xxx
Jan 11, 2000 1:57 pm
Not complex actually, in fact these are very minor points indeed: 1) var2pipe and bruk2pipe issue warnings when there's not enough data for the conversion...
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Frank Delaglio
delaglio@xxxxx.xxxxx....
Jan 11, 2000 2:58 pm
Many Greetings. Regarding Geoff's question about the SCALE1D model function: the actual peak intensities at each plane can be recovered by multiplying the new...
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Virgil Simplaceanu
vs2a+@xxxxxx.xxx.xxxx
Jan 14, 2000 7:04 pm
Excerpts from mail: 11-Jan-100 [nmrpipe] DRX Processing by M.J. Howard@... ... My feeling is that Bruker software applies the window, let's say cosine...
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Frank Delaglio
delaglio@...
Feb 1, 2000 9:39 pm
As you might know, the NMRPipe system now includes the TALOS program program for protein backbone angle prediction using chemical shifts. Installing NMRPipe...
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Deane D McIntyre
dmcintyr@...
Feb 3, 2000 3:24 pm
Gang: We have a 3D data set acquired on a Bruker AMX with acq. order 3-1-2 as opposed to the 3-2-1 order apparently required for nmrPipe processing, according...
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Frank Delaglio
delaglio@...
Feb 8, 2000 2:45 pm
Dear Colleagues, A new version of NMRPipe, built under Red Hat 6.0, has just been posted at the FTP site. This new version contains a performance adjustment...
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Frank Delaglio
delaglio@...
Feb 8, 2000 2:48 pm
Dear Colleagues, We're thinking about organizing an NMRPipe documentation project to make the software more useful for everyone ... so, please forward your...
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Patti Liwang
pliwang@...
Feb 8, 2000 3:25 pm
Hi all, I would say my "dream documentation" for nmrPipe would be: 1. Searchable 2. Have very complete definitions and examples for each command 3. Show...
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Istvan Pelczer
ipelczer@...
Feb 8, 2000 3:39 pm
Dear Pipers, I join Patty both in welcoming the documentation and the list of requirements for an ideal solution. I'll be happy to contribute, too, with...
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Siddhartha P. Sarma
sidd@...
Feb 8, 2000 7:03 pm
Hello Frank /other adept NMRPipe users I just noticed on the resonance designs webpage that a miscellaneous function called "INTEG" exists, which I assume will...
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Jens Kaalby Thomsen
jkt@...
Feb 9, 2000 7:35 am
Hi I have tested nlinLS on various spectra and I now want to use it for a time series of spectra. (I would by the way like some more documentation on the use...
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Istvan Pelczer
ipelczer@...
Feb 17, 2000 10:52 pm
Dear Frank, As far as further improvements of Pipe is concerned, have your given a thought to implementing processing, analysis and visualization of diffusion...
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Xuemei Yuan
x.yuan@...
Feb 22, 2000 5:26 pm
Hello, I have just started using nmrPipe, and I have a problem processing 1D data recorded on a Bruker DRX500. Following is the little script that I used,...
