nmrpipe : Messages : 546-575 of 2007

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546	Hi, I've recently run an experiment that had to be split into two parts due to a time constraint. How would these two datasets for an HCCONH DIPSY be put put...	nmrrose	Jan 5, 2004 11:48 pm
547	Ok, here it goes ... Below is a section from the "bruk2pipe" manual page on combining raw data. The same idea can be used for Varian data, but working out the...	Frank Delaglio bigfdelaglio	Jan 6, 2004 12:13 am
548	Hi, everybody! Is it possible to process a series of spectra, e.g. 2D relaxation time experiments, in NMRPipe? Thanks a lot in advance! Ruth ...	Ruth Boetzel ruth_boetzel	Jan 14, 2004 12:01 pm
549	Hello Ruth, The shell script shown below will do the trick. You need to copy all your data in a separate folder and run the script from there. ...	Mandar T. Naik mantrinaik	Jan 14, 2004 4:11 pm
550	HI Ruth I use a csh script to do this (I have attached it) that takes gzipped ser files. The usage is in the script. It will also convert to nmrview if ...	Mike Osborne ozzy672003	Jan 14, 2004 4:11 pm
551	S.V.B.E.V. dear colleagues ... ... there are also ways to analyze the entire series to extract amplitude evolutions ... have a look at "pub/relax.tar.Z" in the...	Frank Delaglio bigfdelaglio	Jan 15, 2004 6:39 pm
552	Hi everyone, I'm interested in converting a pipe file into an ascii one. I looked for the pipe2txt.tcl file into the com/ directory but it is not there and I...	Duma Luminita l_duma	Jan 18, 2004 12:00 am
553	Hi everyone, I would convert a spectra prosseced with nmrPipe in an Xeasy format, How can i do this???? Many thanks in advance Nicolas Coudevylle...	ncoud	Jan 21, 2004 11:55 am
554	Hi, there might be better ways but this is what I usually do: For 2D spectra, type: showhdr -verb .ft2 > test.header (where .ft2 is the name of your...	Jack Liao jackliao111	Jan 21, 2004 7:34 pm
555	Hi Nicolas, The easiest way I know is using SPSCAN. You need to create a header file (different for 2D/3Ds) from nmrPipe that will be read by one of the SPSCAN...	Pineda-Lucena, Antonio Antonio.Pineda-Lucena...	Jan 21, 2004 7:36 pm
556	Hi, I have recently acquired an array of 1D experiments on a Varian (a T2 series). I have tried to convert the "fid" file using var2pipe but only seem to get...	Suzana Straus suschtis	Jan 21, 2004 10:24 pm
557	Hi, fellow Pipers! Is it possible to do a manual peak picking in NMRDraw? Using the Mouse --> 2D location, right mouse button method I can get labels on peaks,...	Ruth Boetzel ruth_boetzel	Jan 26, 2004 5:29 pm
558	Greetings Colleagues, Ok ... as you may know, nmrDraw has automated 1D-4D peak picking, which is especially wonderly well in 2D and 3D if I do say so myself. ...	Frank Delaglio bigfdelaglio	Jan 26, 2004 7:08 pm
559	Hi Everyone, I have a problem converting a 4D dataset into nmrview format. I think it might be related to size (isn't everything). For example I can convert a...	Mike Osborne ozzy672003	Jan 26, 2004 10:03 pm
560	NMRDRAW PEAK DETECTION The Peak Menu provides commands for automated and interac- tive peak detection in 1D-4D data. The peak detection is actually...	Frank Delaglio bigfdelaglio	Jan 26, 2004 10:05 pm
561	hmmm ... I'm not sure, does NMRView require each axis to be a multiple of 16 points? ......	Frank Delaglio bigfdelaglio	Jan 27, 2004 7:35 pm
562	This may or may not be the problem ... I am unsure of the exact file size (~2GB), but I have seen an error when it reaches that size in the conversion. I...	Douglas Kojetin envirodug	Jan 27, 2004 9:26 pm
563	perhaps you're running out of memory during the conversion to NMRVIEW. I've had it happen when I was transforming a large 3D dataset on a very old system that...	Gerard J. Kroon kroon@...	Jan 27, 2004 10:32 pm
564	I think that you are right, it does seem to be a size issue. Probably your stacksize is too small. You can try to increase it in the csh using "limit...	Geoff Armstrong geoff_armstrong	Jan 28, 2004 3:00 am
565	Hello, i have a problem converting a 2D spectra from nmrPipe to nmrview format. pipe2xyz always stops with a seg. fault whenn i do this: -- IN:>nmrPipe -in...	nmrhorstmann	Jan 30, 2004 4:46 pm
566	HI Frank, Thanks for doing the compilation. Unfortunately it did not work. I was wondering if: a) it was possible to recompile the xyz2pipe in the same manner...	Mike Osborne ozzy672003	Feb 2, 2004 10:05 pm
567	Hi all, I'm using the nmrPipe scripts for lineshape fitting which pre-date autoFit.tcl, but maybe some-one can help me out. The old routines gave two output...	Geoff Kelly gkelly@...	Feb 9, 2004 4:18 pm
568	Hi NMRpipers, Sorry this is a long email about processing of Bruker 3D spectra. To make it more concise I just give links for the some scripts and figures. I...	Yufeng crystalatom	Feb 17, 2004 6:36 pm
569	BTW: if you are interested in the pulse program, you can find a diagram for that at: http://mbalster.cwru.edu/questions/hncocacbgp2h3d.ps It's made with...	Yufeng crystalatom	Feb 17, 2004 6:55 pm
570	hi, can anyone tell me how to make a satisfied ps file from the file menu and hard copy command in nmrDraw? I don't know what X1, X3 and Y1 Y3 means. are they...	Chen Kang k_chen79	Feb 21, 2004 4:12 pm
571	Hi everybody, Has anybody installed the NMRView program in an Apple with Mac OS X version 10.3 "Panther"? Marga -- Margarida Gairi Unitat de RMN d'Alt Camp....	NMR Service marga@...	Feb 25, 2004 4:36 pm
572	Hi Marga, We have successfully upgraded to 10.3 from 10.2.8, and NMRView continues to work just fine. Lorraine -- ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Lorraine...	Lorraine Cavanaugh mayaguezcoqui	Feb 25, 2004 5:48 pm
573	I am trying to install NMRPipe on my SUN machine, but failed. My machine is a terminal, and I am not a superuser, so I could not install those "patches" as ...	Xiangjin Song xiangjinsong	Feb 27, 2004 9:31 pm
574	Hi Xiangjin, Give the install a try without the patches, see what happens :) big fd...	Frank Delaglio bigfdelaglio	Feb 27, 2004 9:44 pm
575	When I use the showhdr program, I find a different OBS frequency is returned to that which I have provided in the original conversion script. Does anyone know:...	dark_isnewcdt	Mar 5, 2004 11:48 am

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