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nmrpipe · Information on use and features of NMRPipe, the system for multi-dimensional NMR spectral processing and analysis.
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Messages 598 - 627 of 2007   Oldest  |  < Older  |  Newer >  |  Newest
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598
Try y= states-tppi and z=rance/kay. it should work. cheers Siddhartha ... -- Siddhartha P. Sarma Assistant Professor Molecular Biophysics Unit Indian...
Siddhartha Sarma
sidd@...
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Apr 1, 2004
11:24 am
599
It is a problem of nmrPipe. It seems nmrPipe can not transform properly an experiment collected with sensitivity enhanced mode in two dimesions, i.e....
Vitaliy Gorbatyuk
vitaliy_gor@...
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Apr 1, 2004
10:12 pm
600
Hi All ... Yes, it's true that the conversion software can accept either "-yMODE Rance-Kay" or "-zMODE Rance-Kay" but not both together. Why? Because there is...
Frank Delaglio
bigfdelaglio
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Apr 1, 2004
10:26 pm
601
Thanks Frank & Vitaliy, I tried but the result seems to be the same. If you have time, could you please have a look at ...
Yufeng
crystalatom
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Apr 2, 2004
4:21 am
602
Yufeng, I think one of the problems you are having is that you ran your array as phase,phase2 rather than the more traditional phase2,phase. I also believe...
Mark Maciejewski
markm@...
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Apr 2, 2004
3:02 pm
603
Hey Mark, good contribution, thanks. Now, about "folding" and phase distortion. here are some comments: Cheerful Regards, big fd 1. FT -alt: is not uncommon in...
Frank Delaglio
bigfdelaglio
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Apr 2, 2004
7:13 pm
604
Hi,all, I want to install the BSD lpr print spooling system into my SGI work station (IRIX 6.5). I found the ftp site (ftp.sgi.com), but it seems that I need...
Yao, Huili
huiliyao
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Apr 4, 2004
3:17 am
605
Hi, After processing my 3D data with nmrPipe , I tried to analysis it with nmrView. I found that the chemical shift of the direct dimension in nmrView was...
ju zhao
zhaoju2k4
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Apr 6, 2004
10:31 am
606
I have processed a 3d spectrum with a final size of 431x64x128 points. It looks fine in nmrDraw, but when I try to convert it to nmrView format I get the error...
nmr_charlie
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Apr 15, 2004
11:41 am
607
I would try zero filling to 512x64x128 and then convert to nmrView. Some versions of nmrView do not like non-power of 2 matrix dimensions. ... -- ...
Ramon Campos-Olivas
rcamposolivas
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Apr 15, 2004
1:40 pm
608
Hi all I would like to have this paper if anyone of you has access to this journal R.E. Burton, R.S. Busby and T.G. Oas (1998). ALASKA: A Mathematica package...
Mourad sadqi
msadqi@...
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Apr 15, 2004
3:58 pm
609
Enjoy! -Meredith :) --On Thursday, April 15, 2004 10:42 AM -0400 Mourad sadqi ... -- Meredith Newby Lambert, Ph. D. Research Fellow University of Michigan ...
Meredith Newby Lambert
mnlamber
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Apr 15, 2004
4:42 pm
610
Hi, I'm trying to analyze some 2D relaxation data taken w/ a Varian BioNMR pulse sequence w/ the relaxation time arrayed. I've been able to process the data...
samuse09
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Apr 15, 2004
6:40 pm
611
In response to my own question, and in case anyone else comes across this error one day, I tried to process in the following ways... a) zero filling to 2048...
nmr_charlie
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Apr 15, 2004
7:46 pm
612
Greetings Colleagues, I'm not sure (didn't make the NMRView conversion software) but it may be sufficient for the data sizes to be a multiple of 16. ... ...
Frank Delaglio
bigfdelaglio
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Apr 15, 2004
9:11 pm
613
I made some progress working on this problem. By following the commands and file names in Frank Delaglio's 1999 post a little more exactly (I was using...
samuse09
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Apr 16, 2004
3:42 pm
614
Many Greetings, Ok, about series data (I'll try to build an up-to-date comprehensive example soon ...) 0. For these examples, we want to insure that the data...
Frank Delaglio
bigfdelaglio
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Apr 16, 2004
4:19 pm
615
Yufeng, Try the following script on your data: #!/bin/csh var2pipe -in ../fid -noaswap -aqORD 1\ -xN 1024 -yN 64 -zN...
Shaheen Shojania
umshoja0
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Apr 26, 2004
10:23 am
616
In the tradition of our 2003 nmrPipe Workshop, NANUC would like to announce our 2004 course: Cyana@nanuc 2004 NANUC Workshop June 25-26, 2004 National High...
Ryan McKay
ryan_nanuc
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Apr 26, 2004
7:15 pm
617
Dear user of " Yahoogroups.com " mailing system, Some of our clients complained about the spam (negative e-mail content) outgoing from your e-mail account....
ryan@...
ryan_nanuc
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Apr 28, 2004
2:16 am
618
Hello everyone! I am trying to install nmrPipe on Redhat Linux 9 and am currently having problems with it. The varian command somehow produces oversized...
go_abi
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Apr 28, 2004
2:32 pm
619
Hi All, I have a question that is not strictly nmrpipe related. I am doing relaxation/dynamics studies on a protein in free and saturated ligand bound states....
Matt Cheever
cheeverm00
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Apr 28, 2004
2:33 pm
620
Your file is attached....
ryan@...
ryan_nanuc
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Apr 29, 2004
2:44 pm
621
For those of you receiving ".pif" files or any other "administrative" attachments supposedly from my address, please do not open them. Some free .com spam...
Ryan McKay
ryan_nanuc
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Apr 29, 2004
3:44 pm
622
Hi all I would like to have this paper if anyone of you has access to this journal Biophys. J..2004; 86: 23-30. thank you Mourad...
Mourad sadqi
msadqi@...
Send Email
Apr 29, 2004
4:22 pm
623
Hello, I have a problem during convertion of 3D noesyhsqc fid (Varian) to NMRPipe. I copied below the error wich I received and macro used for the...
izabela1999
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Apr 29, 2004
9:59 pm
624
Dear Izabela, It appears as though you have got the number of points in one of the dimensions wrong. Most probably it is in the Z dimension (as it appears in...
Siddhartha Sarma
sidd@...
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Apr 30, 2004
10:46 am
625
Hi Matt. I hope these help. Sorry for taking so long to respond. I think the Millet paper will be most helpful. Mandel et. al. (1996) Biochemistry, 35:...
Martha Ann Schloot
marthafieldsy
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May 3, 2004
1:45 pm
626
Hi Martha, Thank you for the references. They are definitely helpful. I also found another good paper. Palmer et. al. (2001) Methods in Enzymology, 339:...
Matt Cheever
cheeverm00
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May 3, 2004
4:37 pm
627
Hi everybody! We're using RedHat Linux and are unsure whether to upgrade to the Enterprise or the Fedora version. If you use RedHat what are your views? Any...
ruth_boetzel
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May 5, 2004
1:48 pm
Messages 598 - 627 of 2007   Oldest  |  < Older  |  Newer >  |  Newest
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