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nmrpipe · Information on use and features of NMRPipe, the system for multi-dimensional NMR spectral processing and analysis.
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Messages 645 - 674 of 2006   Oldest  |  < Older  |  Newer >  |  Newest
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645
Hello All, I am having problems applying Linear Prediction to all indirect dimensions of my 4D data set. I can apply it easily to the individual projections...
Geoff Armstrong
geoff_armstrong
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Jun 10, 2004
6:49 pm
646
Try it first without the back predictions. e.g. x lp y lp z lp a Then add back in the back predictions one at a time and see where/if it fails. However if it...
Ryan McKay
ryan_nanuc
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Jun 10, 2004
8:02 pm
647
Geoff, You may also have a problem with the last step being -in -a -out -y without the inPlace because this arrangement might over-write itself. In addition...
David A. Horita
davidhorita
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Jun 10, 2004
8:13 pm
648
Thanks for the responses, the suggestions have been helpful. But I have not yet been able to get satisfactory results. Just doing the LP of the...
Geoff Armstrong
geoff_armstrong
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Jun 14, 2004
5:46 pm
649
If you skip the first HT does the second HT then cause poor results (i.e. is it always the first HT no matter where it is performed that is causing errors) or...
Ryan McKay
ryan_nanuc
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Jun 14, 2004
7:14 pm
650
Hi, I am working on RDC so can anybody tell me how to process IPAP in NMRpipe and how the script should be written. --Ravi Pratap Barnwal TIFR,Mumbai Image by...
ravi barnwal
ravi13pb
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Jun 15, 2004
10:27 am
651
Does anyone know what has happened to the old nmrpipe manual at: http://lysine.pharm.utah.edu/nmrlab/nmrpipe.html ? My links which were working last week or...
mapponyi
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Jun 15, 2004
10:27 am
652
Dear Ravi, ... -ov -out test.ft2 This script would add the IP and AP experiments, multiplying the AP by 1.1 to compensate for the loss of intensity. To obtain...
Jean-Francois Trempe
jf_trempe
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Jun 15, 2004
11:56 am
653
Dear Margit, http://www.nanuc.ca/downloads/scripts.php We've got the double sensitivity enhanced version of that sequence in our processing scripts library. ...
Ryan McKay
ryan_nanuc
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Jun 15, 2004
6:00 pm
654
Well just an update, It seems that the first HT and LP actually work regardless of which dimension you perform it in, but they introduce so much noise into the...
Geoff Armstrong
geoff_armstrong
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Jun 15, 2004
6:00 pm
655
... http://www.biochem.utah.edu/nmr/nmrpipe.html Ran across it by accident. Hope this is what you need. Laura -- Laura C. Morris Systems Support Specialist III...
Laura C. Morris
lmorris@...
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Jun 15, 2004
6:00 pm
656
Try this one: http://www.biochem.utah.edu/nmr/nmrpipe.html mapponyi <margit.apponyi@...> wrote: Does anyone know what has happened to the old...
ju zhao
zhaoju2k4
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Jun 15, 2004
6:03 pm
657
Thanks Ryan I found the fid.com script but not the XYZ.ft ones. I have used your fid.com and there is an improvement but it is still wrong- I am getting my...
mapponyi
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Jun 16, 2004
1:54 pm
658
... (I think that is the correct syntax) I believe that experiment is basically acquired backwards to the normal acquisition order so it's essentially flipped....
Ryan McKay
ryan_nanuc
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Jun 16, 2004
2:38 pm
659
Thanks a lot- I've got it to work now. Margit ... normal ... to ... still ... missing. ... sequence ... now ... all ... Complex, ... tried ... work ... Yahoo!...
mapponyi
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Jun 17, 2004
12:29 am
660
Hi, I got some old Bruker-Kermit data. I was told that people used to transfer original Bruker data into a Kermit machine before further processing. Can anyone...
Xiangjin Song
xiangjinsong
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Jun 23, 2004
12:37 pm
661
Dear NMRViewers/NMRPipers, I have a problem with transferring data from NMRPipe to NMRView. I ran the HCACONH IPAP described in the paper: deAlba et al, J...
Sabine Ruth Quadt
bine75
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Jun 27, 2004
1:21 pm
662
Hi All, The "addNMR" output was: tp2/sum_%03d.dat But the "xyz2pipe" input used for conversion was: xyz2pipe -in tp2/sum_%03d.DAT As the error message says:...
Frank Delaglio
bigfdelaglio
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Jun 28, 2004
3:22 pm
663
hi, I have a question about the HNMR of HDI(O=C=O=N-CH2-CH2-CH2-CH2- CH2-CH2-N=C=O). I use HDI to synthesize polyurethane. But when I did the HNMR of HDI,the...
beiswood2000
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Jun 30, 2004
5:16 pm
664
Good afternoon, What do you mean by different? Different in intensity ratio (integration), chemical shift, coupling patterns, or all of the above? Just...
Ryan McKay
ryan_nanuc
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Jun 30, 2004
7:50 pm
665
Difficult to guess without knowing all the experimental details, but in principle different integrals ( by "area" you mean "intergal"?) obtained for different...
Dr. A. Golovanov
A.Golovanov@...
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Jul 1, 2004
2:19 pm
666
Thank you,Ryan. It's the area difference,say,the areas of the 3 peaks are 4.0,5.0 and 5.3 respectively. ... above? ... of ... CH2 ... depending ... shifts ... ...
beiswood2000
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Jul 2, 2004
10:43 am
667
I would guess that Dr. Golovanov's explanation is most likely the reason for the difference you're seeing. Try a much longer relax delay and see if that helps....
Ryan McKay
ryan_nanuc
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Jul 5, 2004
6:37 pm
668
Hi, I am having a problem in processing my c13 noesy. I find that the spectra belonging to the first few planes (of 128 tl points) displays symmetry about...
sethchitayat
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Jul 6, 2004
1:31 pm
669
There are a few things I would try: 1.) comment out the Z dimension processing and hilbert section (i.e. just do Z-dimension at the end after X and Y instead...
Ryan McKay
ryan_nanuc
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Jul 6, 2004
5:48 pm
670
Hi, How would I go about removing the streaking I'm seeing in my processed c13noesy? thanks....
sethchitayat
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Jul 8, 2004
3:10 pm
671
Hi All! I need to extract the noise level value from an nmrPipe file using the (Tcl/Tk) command line (nmrWish). Does anybody know how to do that? Thank you, ...
Ilidio Martins
irsmzao
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Jul 8, 2004
7:15 pm
672
hi there, Not a native speaker myself I was delighted by your choice of words. I have never observed streaking in my spectra. Could be entertaining ;=) But to...
Frans Mulder
frans.mulder@...
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Jul 9, 2004
10:51 am
673
I remember seeing a similiar problem with a heteronuclear-edited noesy in the indirect 1H dimension. My recollection was that there were composite 180 pulses...
Hsin Wang
hzwang31
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Jul 10, 2004
2:45 am
674
Indeed, I do know how. Here's a 2D example with an auto-estimate: readROI -roi 1 -ndim 2 -in test.ft2 -x X_AXIS -y Y_AXIS set roiInfo [getROIInfo -roi 1] set...
Frank Delaglio
bigfdelaglio
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Jul 12, 2004
9:09 pm
Messages 645 - 674 of 2006   Oldest  |  < Older  |  Newer >  |  Newest
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