... For those interested in a host of pulse sequences from the Lewis Kay group, please visit http://pound.med.utoronto.ca and fill in the form under downloads....
Hi, Can anyone help me in understanding function QMIX in NMRPipe. How does it work, and what it is used for. I can't find a man page for it. Thanks in advance....
Dear NMRpipe users, I want to calculate a autocorrelation function of my 1D spectra. This funtion is equal to the product between the FID and its complex...
Dear All, I was wondering if it's possible to change the axis labels of a processed spectrum? I have a 3D set and want to project it into a 2D HSQC plane using...
Greetings All ... The QMIX function is a general purpose tool for combining groups of N adjacent rows from the input to produce M adjacent rows in the output. ...
Dear Friends, Yes indeed, there is more than one way to change axis labels (or any other parameters) of an exiting NMRPipe format datafile. One method: nmrDraw...
Good question! This is seldom called for in the days of phase-sensitive NMR, so it hasn't been implemented directly in nmrPipe, although its I good idea, and...
Hello, I am wondering if there is an option that allow me to apply reverse mode for any axis of the 3D data set collected by Bruker, Just like that one ...
Many Greetings, Lads and Lasses, The best way to reverse a given dimension is to negate the imaginaries before FT (use FT -neg) ... keep in mind, this is NOT...
At the NMRPipe download site: 1. "relax.tar.Z" and "jmod.tar.Z" give examples of extracting and analyzing peak amplitide evolution over a series of 2D spectra....
Hi Frank, ... So the zero frequency moves with different number of increments... Is this a purely mathematical consequence or an implementation one? For ...
A colleague once demonstrated to me an 8 points FT of a simulated FID of a single on-resonance peak, and the peak clearly located on the 5th point after FT. I...
by negating the imaginaries, we are reversing the order of the frequencies properly, so that zero freq stays where it is supposed to be. recall that the real...
Hi everyone, I'm new to nmrPipe and am still figuring out how to work everything. Is there a way of moving around while zoomed in on a 2D spectrum? Currently I...
take this Mumdooh #!/bin/csh pipe2xyz -in 2.ft2 -nv -out trosyvl.nv Tata! S. Simon Sauvé Graduate Student Université de Sherbrooke Faculté de Médecine ...
Hello all: I tried all the suggessions sent to me from all of you, but unfortunately no positive result. Here is one of the commands I used xyz2pipe -in...
Try this script instead of seting the complete path in the outfile name. #!/bin/csh # NMRView Data Conversion Script nv.com #remove previous file rm -f...
Mumdooh, Try breaking your command into two steps to see where the problem is. xyz2pipe -in path/file%03d.ft3 > file.pipe pipe2xyz -nv -out file.nv < file.pipe...
An interim update: We have finished up the implementation of FDM in nmrPipe, and are working on the documentaion. This should be finished up shortly. It will...
Hello all, I am trying to process IPAP from Varian and I keep having the same problem. In the script for processing the data the FT continues normally until ...
Hi, all! After I read the nmrPipe macro language manual, I try to use the xz.M to extract a xz plane from a 3D fid matrix. The command is: M xz.M -str inName...
Hi, all! Yesterday I try to extract a N15-Hsqc-like sub-spectrum from a hnco 3D fid matrix, but I have some difficulity while doing that. After discussion with...
Hi everyone, how does one interact w/ pipe data from outside? i.e. how does one read pipe data into an external program or write data from an external program...
Srinivasan Chandra Sh...
scshekar@...
May 28, 2005 11:54 am
953
My oh my, Chandra Shekar, I would have thought that after 20+ emails to me, you would have this issue straight by now. Still, for the benefit of the others in...
Extracts the first XZ plane from a 3D hypercomplex FID: $NMRTXT/ext.xz.com fid/test%03d.fid xz001.fid Or, add one more argument to extract the Nth XZ plane: ...
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