Can reconstruct be used for generating 3d models from brain atlases... like 160 images? Also can the z trace smoothing method be applyed to multiple objects in...
Hello, I'm trying to reconstruct part of an ovary and would like to be able to get x y z coordinates from structures within the overy. Is this possible with...
Hello Sarah, It is possible to list these coordinates. To do this, you should go to the Series->Options... menu item in Reconstruct. This will bring up a...
A colleague and I are working on a fairly large trace project, and while tracing he switched the object he was tracing, then when he went back to the trace...
I'm sure it can be retrieved as long as the traces still exist. Go to the section where you think the trace is and click on it. Then use cntrl A to see it's...
Hey there, does anyone know if it is possible to create an irregular region for Wildfire instead of just a rectangle? That would be great as I want to start...
Yes, I know that. But you can also draw a box and let Wildfire segment all regions within this box. My question is if there is a way to draw a free-hand region...
Not yet... we are working on autsegmentation routines in our lab and others, but to my knowledge, Reconstruct only does the box... Sorry for misunderstanding...
No problem, thank you for the answer anyway. What kind of software do you use for autosegmentation? Unfortunately, Reconstruct crashes when the box is drawn...
Yes, the 64 bit build of Reconstruct is now available. I think Larry Lindsey or Bitao Shi put it in our Tools section of our website -- but I am copying him to...
Hm, had some hardwareproblems here - I was wondering if 64bit means Win7 or Linux... How many domains are possible with the 64bit version? I am trying to...
Oh, that would be great. By combining "64bit" and "Mac" in one sentence...does that mean it's a Mac 64bit Version, Linux or Win7? I jsut checked your homepage...
YEs -- I have a Mac with Os X -- but I hate parallels... hopefully bootcamp will be better. What I hate about parallels is that it doesn't keep track of new...
Hi to all, I am currently working more and more with Reconstruct as an alternative to Amira and remembered the posts in the group about improvements for the...
Hi, I am trying to reconstruct part of a spinal cord, showing the vasculature, but I am having trouble increasing the size of the reconstruction in the 3D...
Dear Roshni, I am not sure I understand your question but I guess what you are after is changing the Thickness parameter (Select all the sections in the...
Dear Thomas, I realise my mistake now, I forgot to provide a pixel size value when importing my data. I will try this. Thanks for your help. Thanks Roshni ... ...
Dear Kristen, I have two more questions regarding Reconstruct: (1) are you planning to implement a way to draw a freehand-region for Wildfire? (2) in my...
Hey, in a large image of the sciatic nerve there are 1000-2000 axons to segment, which actually works in all 10 images. But whenever I want to see the list...
Check your setting for list in series options. Try downloading 64 bit reconstruct. However 1000 objects should not be a problem Sent from my iPhone On Mar 12,...
Dear Mortimer, As I understand from the screen shots, you did not trace the axons individually; rather, what you created (wildfire ?)is one massive multi-part...
Dear Mortimer, The short answer is no (but wait for Christen Harris's answer, she and John Fiala are the most knowledgeable posters about what Reconstruct can...
