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simpson-simmol · The SIMPSON - SIMMOL Discussion Forum

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  • Members: 363
  • Category: Chemistry
  • Founded: Dec 10, 2001
  • Language: English
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Dear Simpson users, I'm using ubuntu 11.1 on a 64bits machine and I want to install simpson 3.1 from sources in order to run parallel calculations (the...
17 Nov 17, 2012
4:40 pm

janarthanan_k2004
janarthanan_...
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Dear ALL,   Does anyone know how to extracting the CSA information from the spin system? such as shift_1_aniso? Best Bingwen Dear ALL, Does anyone know how to...
6 Sep 15, 2012
2:02 pm

Bingwen Hu
bw.hu
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I just wanted to share the following patch that allowed me to compile simmol on Gentoo-3.5.2 x86_64 (tcl8.5). (simpson itself works as provided in the science...
1 Aug 28, 2012
4:55 pm

lsvermeer
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Can somebody tell me what the file format is of the binary spe files, particularly for 2D spectra? I know that files can be saved as NMRPIPE or ASCII files but...
3 Apr 15, 2012
1:29 pm

lsvermeer
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I get those. I usually restart my mac and then it works fine. But i make sure that i run simpson first. Then when its running i open up my other programs....
2 Apr 8, 2012
8:39 pm

hell crasher
subhradip_paul
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The Mac version gives me segmentation fault on the same files which runs fine on windows. I tried to run without any modifications. Does anybody have any idea...
1 Apr 8, 2012
5:01 pm

hell crasher
subhradip_paul
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Hello, I have previously run some simulations on glycine using a spinsys section I obtained from my tutor. I would now like to run some similar simulations...
1 Apr 3, 2012
2:02 pm

profiterolfs
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Hello, I have been trying to simulate some double-rotation (DOR) NMR spectra with simpson although there seems to be a major issue.  The output spectrum...
2 Mar 7, 2012
1:31 pm

RNDr. Zden€  Ä’»k To€...
ztosner
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Hi everyone: I have some questions about the offset in simpson simulation. In simpson simulation, the offset was defined as w(off) ‡"IjZ. I am confused...
1 Feb 29, 2012
5:16 pm

jinjunren
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Hello, I have been trying to use Simpson to simulate a pulse sequence in a 13C-14N coupled system, extract density operator matrices at various points in the...
4 Feb 17, 2012
2:24 pm

Julien TREBOSC
jtrebosc
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Dear developpers, I'm trying to run simpson with MPI on an heterogeneous cluster. I mean networking 5 or 6 user desktops (~30 cores) under linux with...
3 Dec 6, 2011
11:21 am

Julien TREBOSC
jtrebosc
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Hi all, I am relatively new to Simpson. I modified a Magic angle turning NMR sequence by replacing the 90 degree pulses with HS 90 pulses of Shaka et al (JMR...
1 Nov 23, 2011
2:49 pm

Arvind
arvinda82
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Hi all As you may have noticed, we removed the minuit functions in version 3.0 because they caused instabilities and errors. I have just released an...
7 Oct 27, 2011
7:14 pm

Thomas Vosegaard
vosegaard
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Dear all It is a pleasure for me to announce the release of SIMPSON version 3.1.0. This is a bug fix release that fixes a few bugs in the OC routines and for...
5 Oct 25, 2011
8:09 pm

nhmhfrey
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Hello, I am new to the SIMPSON package and would like some help in knowing how it might be possible to program adiabatic pulses in SIMPSON? Any help in this...
2 Oct 23, 2011
1:29 pm

Thomas Vosegaard
vosegaard
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Hello, if I use second order quadrupole terms in the simulation, will SIMPSON capture the cross terms, such as quadrupole-dipole, quadrupole-CSA?...
1 Oct 17, 2011
2:42 am

evgeny.markhasin
evgeny.markh...
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Hello, I come up with a couple more questions. If I put "delay 20" in the pulse sequence, the result is the same as with "delay 9999". If I put "delay 2" or...
3 Oct 17, 2011
2:32 am

evgeny.markhasin
evgeny.markh...
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Could you please comment on implicit acquisition employed by gcompute? Specifically, how does acquisition occur when the pulse sequence only consists of...
1 Oct 11, 2011
12:45 pm

evgeny.markhasin
evgeny.markh...
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Can SIMPSON do cosine transform of real data?...
2 Sep 19, 2011
4:16 am

Thomas Vosegaard
vosegaard
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If I have, say, {13C 13C 1H} spin system. Is it possible to detect simultaneously multiple operators, e.g. I1p, I2p, I3x, rather than just their sum?...
3 Sep 7, 2011
4:01 am

Thomas Vosegaard
vosegaard
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Hello, I have modified the "Simplex.c" file and emailed the updated version to Professor Vosegaard. I was wondering if my message made it through. Thanks, ...
1 Sep 5, 2011
3:14 pm

evgeny.markhasin
evgeny.markh...
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Hello, SIMPSON for windows filters backslashes from command line parameters, which is improper behavior on windows. Please fix it....
4 Aug 31, 2011
7:12 pm

Zdenek Tosner
ztosner
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Dear all, ... quadrupole 1 2 18e6 0.9 0 0 0 ... Also, if one ends up having large quadrupolar coupling constants from a Density-Functional-Theory...
1 Aug 19, 2011
12:59 pm

rs_comp_chem
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Hello SIMPSON users, Hopefully you guys can spot what I'm doing wrong here, I'm a little confused. When simulating an echo in a 14N spectrum, it only works...
6 May 19, 2011
1:39 pm

Julien TREBOSC
jtrebosc
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Dear ALL, Does anyone have met this problem when compiling SIMPSON 3.1 with INTEL MKL 11.1: ...
3 Apr 11, 2011
7:54 am

Bingwen Hu
bw.hu
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Hello all, I would like to follow changes in the density matrix at various points using the "putmatrix&quot; command, but I'm having trouble. I can print out the...
4 Mar 21, 2011
6:57 pm

Julien TREBOSC
jtrebosc
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Hi everyone, I'm sorry for the very stupid question but I'm stuck and I need some helping hand... I'm simulating ROCSA on carbonyls (basing on the tar file...
1 Mar 17, 2011
1:57 pm

enrico_ravera
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Dear developper, It looks that simpson 3.0 for windows doesn't support cluster mode any more. Why? SIMPSON 1.1 supports. Best Bingwen...
2 Mar 12, 2011
5:15 am

Thomas Vosegaard
vosegaard
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Hi,dear all I try to set simpson for parallel calculation and have some questions about the installation. 1. Should all the hosts in the same lan? 2. Before...
1 Sep 7, 2010
8:48 am

freeyfish
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Dear SIMPSON users It is my pleasure to announce our release of SIMPSON version 3.0. The code is now substantially faster allowing for calculations on ...
17 Jul 8, 2010
2:16 pm

Thomas Vosegaard
vosegaard
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